{"id":"W2164419047","doi":"10.1128/jb.185.2.674-678.2003","title":"Experimental Verification of a Sequence-Based Prediction: F <sub>1</sub> F <sub>0</sub> -Type ATPase of <i>Vibrio cholerae</i> Transports Protons, Not Na <sup>+</sup> Ions","year":2003,"lang":"en","type":"article","venue":"Journal of Bacteriology","topic":"Vibrio bacteria research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":27,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Manitoba","funders":"National Cancer Institute; Natural Sciences and Engineering Research Council of Canada; American Lebanese Syrian Associated Charities","keywords":"Vibrio cholerae; Biology; ATPase; Vibrio; Escherichia coli; Protein subunit; Bacteria; Vesicle; Mutant; Biochemistry; Enzyme; Archaea; Membrane; Biophysics; Microbiology; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001570135,0.0006190416,0.0005380828,0.0003147535,0.0008589346,0.0005779912,0.001181322,0.001212199,0.004115926],"category_scores_gemma":[0.006344886,0.0002610061,0.0005034049,0.0004013942,0.0007485378,0.0004980099,0.0004259914,0.001163948,0.002286831],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0008200359,"about_ca_system_score_gemma":0.001657153,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.005241907,"about_ca_topic_score_gemma":0.003423273,"domain_scores_codex":[0.9986437,0.0002626129,0.0001460698,0.0002553837,0.000533219,0.0001589726],"domain_scores_gemma":[0.9954975,0.001761366,0.0003512049,0.0004672209,0.001705153,0.0002176135],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003965046,0.000231115,0.002653906,0.0002610117,0.00002313489,0.0002740863,0.0001152406,0.001966328,0.9875807,0.001366141,0.0007206647,0.00441116],"study_design_scores_gemma":[0.00006678641,0.0004853299,0.003583089,0.00002351952,0.00003374946,0.0003729739,0.00009615556,0.01092258,0.9791079,0.0004473165,0.004835962,0.00002464989],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.923973,0.001087233,0.05466334,0.001339267,0.0005170214,0.0002620902,0.00564156,0.0008680174,0.01164848],"genre_scores_gemma":[0.9385658,0.0005510525,0.05015539,0.0003018004,0.00004506041,0.0002091861,0.007211498,0.0002077229,0.002752492],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.005241907,"threshold_uncertainty_score":0.01376921,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02241359560992836,"score_gpt":0.2683744391460302,"score_spread":0.2459608435361018,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}