{"id":"W2164572104","doi":"10.1136/jclinpath-2012-201417","title":"T-cell clonality is detected in a high frequency among patients with incidental lymphocytosis by PCR assays for <i>TCR</i> gene rearrangements","year":2013,"lang":"en","type":"article","venue":"Journal of Clinical Pathology","topic":"Lymphoma Diagnosis and Treatment","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto; Mount Sinai Hospital","funders":"","keywords":"Lymphocytosis; Immunophenotyping; T-cell receptor; Gene rearrangement; Biology; Immunology; CD8; Molecular biology; Pathology; T cell; Virology; Medicine; Antigen; Gene; Genetics; Immune system","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008232385,0.000226331,0.001006901,0.0001194065,0.00004638636,0.00001915648,0.0001577564,0.0003020264,0.0001695195],"category_scores_gemma":[0.0004913153,0.0001518024,0.0002941967,0.0001560781,0.0001633113,0.0001827956,0.00004670312,0.0002680632,0.00002529595],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002799315,"about_ca_system_score_gemma":0.0002248959,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003802921,"about_ca_topic_score_gemma":0.00004219107,"domain_scores_codex":[0.9968902,0.000268312,0.001715516,0.0003378667,0.0004330308,0.0003550641],"domain_scores_gemma":[0.9972437,0.0005481256,0.001057829,0.0002673537,0.0005591138,0.0003238759],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0008652852,0.003761202,0.98351,0.00002690633,0.0001610293,0.0002587039,0.00005402878,4.86199e-7,0.0009248565,0.00000190055,0.006516946,0.00391865],"study_design_scores_gemma":[0.03094641,0.004425202,0.9612908,0.00009202704,0.000288946,0.00006716532,0.00002116095,0.000007951624,0.002352006,0.0002384286,0.0001311227,0.0001387673],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.997647,0.0002519543,0.00007889887,0.0006122149,0.0003414743,0.000816777,0.00009629948,0.000009442376,0.00014592],"genre_scores_gemma":[0.9930235,0.0001838176,0.004532802,0.001875975,0.0001588053,0.00008569056,0.000057571,0.0000276018,0.00005424657],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.03008113,"threshold_uncertainty_score":0.6190323,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02161864181639766,"score_gpt":0.3049706478318672,"score_spread":0.2833520060154695,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}