{"id":"W2164830762","doi":"10.1111/j.1365-2958.2005.04505.x","title":"The expanding world of small RNAs in the hyperthermophilic archaeon <i>Sulfolobus solfataricus</i>","year":2005,"lang":"en","type":"article","venue":"Molecular Microbiology","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":60,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada; National Science Foundation","keywords":"Sulfolobus solfataricus; Biology; RNA; Small nucleolar RNA; Genetics; Transfer RNA; Sulfolobus; ORFS; Guide RNA; Molecular biology; Open reading frame; Non-coding RNA; Archaea; Gene; Peptide sequence; Genome; Cas9","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006682792,0.0001942315,0.0001967754,0.00006495786,0.0001185347,0.00001601458,0.0007051632,0.0001578511,0.00001174307],"category_scores_gemma":[0.00007979701,0.000118879,0.0001457903,0.000164735,0.0002214394,0.000002159206,0.0001625804,0.0001529992,0.00001310956],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001436933,"about_ca_system_score_gemma":0.00003884295,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003753586,"about_ca_topic_score_gemma":0.0005659192,"domain_scores_codex":[0.9984651,0.0004059704,0.0003320086,0.0003334018,0.00005801083,0.000405572],"domain_scores_gemma":[0.9991213,0.00008259226,0.000130931,0.000597656,0.00003754808,0.0000299748],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00007627562,0.0000442316,0.0001142124,0.000005272549,0.00003449761,0.000008635185,0.000106627,0.00005648742,0.986187,0.0007744416,0.0002314469,0.01236092],"study_design_scores_gemma":[0.0003039844,0.0001208328,0.0000914841,0.00001126315,0.00001178786,0.00007727226,0.00006537661,0.000004981352,0.8338041,0.0002858801,0.1650902,0.0001328007],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9858164,0.007796978,0.002352809,0.002134857,0.0001269387,0.0004147627,0.00001444264,0.00000843758,0.00133437],"genre_scores_gemma":[0.9968294,0.0002817492,0.0009722063,0.001382386,0.0001102392,0.00006244578,0.00004580078,0.00002348452,0.0002922889],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1648587,"threshold_uncertainty_score":0.4847744,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009735499822578871,"score_gpt":0.2187300755100421,"score_spread":0.2089945756874633,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}