{"id":"W2165023188","doi":"10.1186/bcr2919","title":"Rare variants in the ATMgene and risk of breast cancer","year":2011,"lang":"en","type":"article","venue":"Breast Cancer Research","topic":"BRCA gene mutations in cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":231,"is_retracted":false,"has_abstract":true,"ca_institutions":"Lunenfeld-Tanenbaum Research Institute; Cancer Care Ontario; Mount Sinai Hospital","funders":"National Cancer Institute; Medical Research Council; U.S. Public Health Service; Cancer Australia; Norris Cotton Cancer Center; National Institutes of Health; Fox Chase Cancer Center; National Breast Cancer Foundation; Huntsman Cancer Institute; Georgetown University; National Health and Medical Research Council; Cancer Care Ontario","keywords":"Breast cancer; Surgical oncology; Medicine; Oncology; Internal medicine; Cancer; Bioinformatics; Biology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008779022,0.0001149659,0.0001266165,0.00009449186,0.0001100033,0.00001822144,0.0003960579,0.0001114481,0.0003886231],"category_scores_gemma":[0.000030002,0.00008623947,0.00003920397,0.0003849374,0.0003140494,0.000007225637,0.0001821486,0.0002443429,0.000003956184],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00008836724,"about_ca_system_score_gemma":0.0005649272,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01306046,"about_ca_topic_score_gemma":0.004794482,"domain_scores_codex":[0.9984344,0.0003364612,0.000185215,0.0003614161,0.0003310922,0.0003514327],"domain_scores_gemma":[0.9990883,0.00002924303,0.00006501943,0.0004507622,0.0003034467,0.00006320926],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001230003,0.0002574619,0.7989853,0.0001125076,0.0002691165,0.00001625704,0.003009123,0.00009029452,0.0924279,0.0002120255,0.006844074,0.09654592],"study_design_scores_gemma":[0.0006322145,0.00005714067,0.9817813,0.00004784041,0.00002075979,0.0001018161,0.0005060146,0.00003074532,0.01496758,0.0001837615,0.001550028,0.0001207659],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9927017,0.003830801,0.00002528533,0.0008144738,0.00009220545,0.0003066206,0.0009866937,0.000003575678,0.001238607],"genre_scores_gemma":[0.9933624,0.005667882,0.0001310542,0.00007051646,0.0002428649,0.0003172161,0.00001132606,0.00002213012,0.0001746512],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.182796,"threshold_uncertainty_score":0.9935117,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04870245419229828,"score_gpt":0.3567711079926521,"score_spread":0.3080686538003538,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}