{"id":"W2165195065","doi":"10.1186/s13059-014-0568-y","title":"Comprehensive miRNA sequence analysis reveals survival differences in diffuse large B-cell lymphoma patients","year":2015,"lang":"en","type":"article","venue":"Genome Biology","topic":"MicroRNA in disease regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":110,"is_retracted":false,"has_abstract":true,"ca_institutions":"Simon Fraser University; University of British Columbia; BC Cancer Agency; Canada's Michael Smith Genome Sciences Centre","funders":"National Cancer Institute; BC Cancer Agency; Canadian Institutes of Health Research; National Human Genome Research Institute; BC Cancer Foundation; University of British Columbia; Cancer Research Society; Terry Fox Research Institute; National Institutes of Health; U.S. Department of Health and Human Services; Terry Fox Foundation; Genome British Columbia; Leukemia and Lymphoma Society; Michael Smith Health Research BC; Leukemia and Lymphoma Society of Canada; Canada's Michael Smith Genome Sciences Centre; Genome Canada","keywords":"Biology; Human genetics; Sequence (biology); Computational biology; Genome Biology; microRNA; Genetics; Evolutionary biology; Diffuse large B-cell lymphoma; Sequence analysis; Lymphoma; Bioinformatics; Genomics; Genome; Gene; Immunology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002064945,0.0001421789,0.0002692506,0.0006330835,0.000184316,0.0003035334,0.0001369039,0.0002254516,0.0008474345],"category_scores_gemma":[0.0005668697,0.00009656605,0.0002097757,0.0005028977,0.0001061842,0.0001337358,0.0002601869,0.0001949731,0.0002746746],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001784773,"about_ca_system_score_gemma":0.0001190286,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006337862,"about_ca_topic_score_gemma":0.0009764443,"domain_scores_codex":[0.9998457,0.00002025496,0.00002007073,0.00005772227,0.0000312825,0.0000250619],"domain_scores_gemma":[0.999705,0.00005852598,0.0001132526,0.00002173203,0.00004843043,0.00005314853],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001285091,0.00004688029,0.9489816,0.00003845085,0.00009949508,0.0002083027,0.0001445321,0.0002604216,0.03587529,0.000039898,0.0002906118,0.01272942],"study_design_scores_gemma":[0.00001556481,0.0002058443,0.9946162,0.000004274579,0.00006416722,0.0007445008,0.0001061297,0.0009276452,0.002536392,0.00005171311,0.0007210931,0.000006527776],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9991291,0.0001776605,0.0001573098,0.00001217057,0.000001543948,0.00000361157,0.000373869,0.000009088912,0.0001356626],"genre_scores_gemma":[0.9985393,0.00006336554,0.0002720761,0.00001700179,0.000003598584,0.000009488586,0.0009740917,0.000004445862,0.0001166077],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0008474345,"threshold_uncertainty_score":0.002834916,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03346323597296717,"score_gpt":0.2700165833505803,"score_spread":0.2365533473776131,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}