{"id":"W2165198888","doi":"10.1371/journal.pone.0115042","title":"Analysis of Putative Apoplastic Effectors from the Nematode, Globodera rostochiensis, and Identification of an Expansin-Like Protein That Can Induce and Suppress Host Defenses","year":2015,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Nematode management and characterization studies","field":"Agricultural and Biological Sciences","cited_by":63,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Sherbrooke; Agriculture and Agri-Food Canada","funders":"Agriculture and Agri-Food Canada; Natural Sciences and Engineering Research Council of Canada; Fonds de recherche du Québec – Nature et technologies; Agricultural Research Service; U.S. Department of Agriculture","keywords":"Apoplast; Biology; Effector; Globodera rostochiensis; Potato cyst nematode; Expansin; Cell biology; Globodera pallida; Secretion; Cytoplasm; Plant defense against herbivory; Vacuole; Nematode; Cell wall; Botany; Solanaceae; Genetics; Biochemistry; Gene expression; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001337049,0.00009237023,0.000269868,0.00002316583,0.00008751606,0.00005074823,0.00008613161,0.00002966651,0.00000543218],"category_scores_gemma":[0.00007534833,0.00003647509,0.00002475172,0.0003370876,0.0001169094,0.000119425,0.00007792791,0.00003280271,3.828378e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000004445832,"about_ca_system_score_gemma":0.000002495547,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000529785,"about_ca_topic_score_gemma":0.0006865331,"domain_scores_codex":[0.9991936,0.0001111849,0.0001829864,0.0001907009,0.0002403414,0.00008118073],"domain_scores_gemma":[0.9993724,0.0001948617,0.0002073121,0.00006210451,0.0001196229,0.00004368933],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00005728298,0.0002431,0.1172771,0.00003296977,0.0007140676,4.943617e-7,0.002592387,0.000004145494,0.8785233,0.00006137857,0.000006289095,0.0004874276],"study_design_scores_gemma":[0.0001231369,0.00009531558,0.8729463,0.00003737512,0.0006448997,9.958346e-8,0.003158427,0.0004045809,0.1224277,0.00007827817,0.000002023537,0.00008189626],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9989225,0.0001391018,0.000007939379,0.0003478387,0.00001142401,0.0003491564,0.0001982871,0.00001404388,0.00000972013],"genre_scores_gemma":[0.9996409,0.00002628622,0.00002895143,0.00003280084,0.00001551235,0.00002615886,0.0002047125,9.082886e-7,0.00002377103],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7560956,"threshold_uncertainty_score":0.1487411,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05571009081034875,"score_gpt":0.2237591109342798,"score_spread":0.1680490201239311,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}