{"id":"W2165273738","doi":"10.1007/s00705-009-0367-z","title":"Secoviridae: a proposed family of plant viruses within the order Picornavirales that combines the families Sequiviridae and Comoviridae, the unassigned genera Cheravirus and Sadwavirus, and the proposed genus Torradovirus","year":2009,"lang":"en","type":"article","venue":"Archives of Virology","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":271,"is_retracted":false,"has_abstract":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"","keywords":"Biology; Lineage (genetic); Phylogenetic tree; Genetics; Nepovirus; Type species; Genus; Plant virus; Genome; Virology; Evolutionary biology; Gene; Virus; Zoology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["sts"],"consensus_categories":[],"category_scores_codex":[0.0009743212,0.0003784698,0.0006218227,0.00003908093,0.001040442,0.0001102329,0.0008528605,0.0001041234,0.000006367926],"category_scores_gemma":[0.0002760463,0.00009435547,0.0001015913,0.0002788678,0.00651319,0.0001144059,0.0005159285,0.0004454614,0.00000148958],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000006852407,"about_ca_system_score_gemma":0.00004077645,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002310733,"about_ca_topic_score_gemma":0.003509853,"domain_scores_codex":[0.9968864,0.001272777,0.0005060185,0.0004552649,0.000399256,0.0004802335],"domain_scores_gemma":[0.9948622,0.004339766,0.0003965287,0.000271843,0.00005009259,0.00007955752],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.002692282,0.0001305242,0.006218466,0.00003262489,0.0002344254,0.00001007259,0.004102467,0.00001354767,0.9378207,0.003485687,0.0003176626,0.0449416],"study_design_scores_gemma":[0.002610368,0.001932661,0.9374824,0.00006636753,0.0001860437,0.0001220044,0.005580599,0.001156638,0.03205699,0.009280176,0.009089557,0.0004362498],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9788158,0.01051677,0.000006053889,0.008550829,0.00006239754,0.001300674,0.0004619748,0.00003078455,0.0002547404],"genre_scores_gemma":[0.9906875,0.006594791,0.00006899653,0.002445927,0.00008489451,0.00004198281,0.00001849386,0.000004238538,0.00005313163],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9312639,"threshold_uncertainty_score":0.9961905,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03007654969200386,"score_gpt":0.2401272901494979,"score_spread":0.210050740457494,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}