{"id":"W2165445607","doi":"10.1074/jbc.m401228200","title":"Proteomic Analysis of the Intestinal Epithelial Cell Response to Enteropathogenic Escherichia coli","year":2004,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"Escherichia coli research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":88,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"National Institutes of Health; Michael Smith Health Research BC; Genome Canada","keywords":"Enteropathogenic Escherichia coli; Effector; Biology; Microbiology; Type three secretion system; Secretion; Pathogen; Escherichia coli; Virulence; Cell biology; Biochemistry","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001188174,0.0002861259,0.0002103439,0.0003267745,0.0001787148,0.0002637103,0.0001030218,0.0002531344,0.0005222535],"category_scores_gemma":[0.000132312,0.00009091564,0.0002040961,0.0003392119,0.0001236069,0.0001222377,0.0001851747,0.0002522673,0.0002573173],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001281409,"about_ca_system_score_gemma":0.0001148773,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004305343,"about_ca_topic_score_gemma":0.0005337321,"domain_scores_codex":[0.9999166,0.00001270565,0.000006301509,0.00002140833,0.00002796791,0.00001494951],"domain_scores_gemma":[0.9999138,0.00001728351,0.00001439006,0.000006912285,0.00002856177,0.00001893994],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00003841338,0.00000573641,0.0005551066,0.00002284444,0.000004716348,0.00004120258,0.00001048922,0.0000171841,0.9988468,0.000006248128,0.00001971057,0.0004314688],"study_design_scores_gemma":[0.00001220207,0.0004215994,0.1693699,0.00001837194,0.00007434572,0.001200615,0.0003450997,0.001957424,0.8223752,0.00008042208,0.004128195,0.00001668239],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9924388,0.001313124,0.003929731,0.0001034397,0.0000250335,0.00002899221,0.001289063,0.0000431984,0.0008285412],"genre_scores_gemma":[0.9801974,0.002766084,0.01043254,0.000261655,0.00002126134,0.0000571781,0.004112623,0.00003020629,0.002121018],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0005222535,"threshold_uncertainty_score":0.001747131,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01464949414165557,"score_gpt":0.2683200295994979,"score_spread":0.2536705354578423,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}