{"id":"W2165521581","doi":"10.1093/molbev/msu226","title":"Transcript Length Mediates Developmental Timing of Gene Expression Across Drosophila","year":2014,"lang":"en","type":"article","venue":"Molecular Biology and Evolution","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":60,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"National Institute of General Medical Sciences; Natural Sciences and Engineering Research Council of Canada; National Institutes of Health; Swinburne University of Technology","keywords":"Biology; Transcriptome; Gene; Intron; Genetics; Drosophila melanogaster; Gene expression; RNA-Seq; Drosophila (subgenus); Regulation of gene expression; Evolutionary biology","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001321353,0.0001264858,0.0001418588,0.0002627549,0.0001087117,0.0003977121,0.0001777306,0.0001663798,0.0007783307],"category_scores_gemma":[0.0003412326,0.000212185,0.0001070739,0.0001380212,0.0001814603,0.0002296481,0.0002777766,0.0003074862,0.0002908882],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004479698,"about_ca_system_score_gemma":0.0001736408,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006650159,"about_ca_topic_score_gemma":0.002069029,"domain_scores_codex":[0.999873,0.00001324074,0.0000103895,0.00005241645,0.000033604,0.00001734505],"domain_scores_gemma":[0.9996597,0.0001055414,0.0001213476,0.00002818905,0.00004742316,0.00003788595],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00003254688,0.000002312633,0.001950187,0.00001110217,0.000003228218,0.00002398863,0.00002219043,0.00009089835,0.9967622,0.00008663753,0.00001175902,0.001002965],"study_design_scores_gemma":[0.00002417087,0.0001793513,0.3339134,0.00002168247,0.00005857885,0.0005012366,0.0001418639,0.00404891,0.6571429,0.0006040599,0.00333848,0.00002530333],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9968607,0.0003190386,0.001776117,0.00002431124,0.000003696838,0.000004070654,0.0002445181,0.00003283493,0.0007346363],"genre_scores_gemma":[0.9974826,0.0002149239,0.001033814,0.00003486598,0.000003692599,0.000008808095,0.0004417279,0.00004015212,0.0007394496],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0007783307,"threshold_uncertainty_score":0.003250301,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009967845284362196,"score_gpt":0.2767613266125593,"score_spread":0.2667934813281971,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}