{"id":"W2165878700","doi":"10.1128/aem.01507-07","title":"Identification of <i>Campylobacter jejuni</i> Genes Involved in the Response to Acidic pH and Stomach Transit","year":2008,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":104,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Ottawa","funders":"National Institute of Allergy and Infectious Diseases; Natural Sciences and Engineering Research Council of Canada; National Institutes of Health","keywords":"Campylobacter jejuni; Biology; Gene; Microbiology; Heat shock protein; Gene expression; Stomach; Gene expression profiling; Heat shock; Biochemistry; Bacteria; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003698065,0.0001194199,0.0001973204,0.00001662689,0.00009629708,0.00000473998,0.0001396814,0.0001134681,0.00003098127],"category_scores_gemma":[0.000005412349,0.00004932851,0.00002807491,0.00008465144,0.0003912752,0.00002334132,0.00005458389,0.00007642736,0.000012079],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001106598,"about_ca_system_score_gemma":0.000001797452,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004780755,"about_ca_topic_score_gemma":0.00006671672,"domain_scores_codex":[0.9990454,0.0001963818,0.0002540496,0.0002827478,0.00003028821,0.0001911216],"domain_scores_gemma":[0.9995927,0.0002363579,0.00006250585,0.00006532697,0.000001875105,0.00004119094],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001940781,0.00006347385,0.03985694,0.000001987081,0.000005441412,0.000002014473,0.000464422,0.00000131066,0.9551834,0.00002840747,0.00004872766,0.004149843],"study_design_scores_gemma":[0.0002869595,0.0002203895,0.9316252,0.000002582039,0.000009397551,0.0001064369,0.00153675,0.000001992162,0.06026912,0.0001153536,0.005687169,0.0001386133],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9982141,0.0004463159,0.000004025262,0.0009802256,0.00002303909,0.0002336961,0.00006653932,0.000007159668,0.00002486374],"genre_scores_gemma":[0.9981974,0.0005188865,0.000017827,0.001107281,0.00002506933,0.00002505916,0.00008737014,0.000001036111,0.00002002444],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8949143,"threshold_uncertainty_score":0.2011558,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01183662402997782,"score_gpt":0.1861326601331582,"score_spread":0.1742960361031804,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}