{"id":"W2166256677","doi":"10.4238/2014.april.16.4","title":"A tiered barcode authentication tool to differentiate medicinal Cassia species in India","year":2014,"lang":"en","type":"article","venue":"Genetics and Molecular Research","topic":"Phytochemistry and biological activity of medicinal plants","field":"Agricultural and Biological Sciences","cited_by":46,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph","funders":"National Medicinal Plants Board, Ministry of AYUSH, Government of India; Ministry of Ayurveda, Yoga and Naturopathy, Unani, Siddha and Homoeopathy","keywords":"DNA barcoding; Biology; Barcode; Indel; Cassia; Locus (genetics); Botany; Evolutionary biology; Genetics; Gene; Single-nucleotide polymorphism; Genotype","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004567007,0.00007642523,0.0001136697,0.00001436314,0.0001445744,0.0000662381,0.0002178472,0.00007416075,0.0000837263],"category_scores_gemma":[0.0002129014,0.00003180093,0.00001819969,0.0001119632,0.0001112348,0.00001172778,0.0001658157,0.000172228,0.000008757774],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001136059,"about_ca_system_score_gemma":0.000003856672,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00006077486,"about_ca_topic_score_gemma":0.00003829798,"domain_scores_codex":[0.99891,0.0001139596,0.000110198,0.0002547851,0.0003179637,0.0002931583],"domain_scores_gemma":[0.9996347,0.00009727412,0.00002097917,0.00006526011,0.00003773992,0.0001439772],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00002947203,0.0000474182,0.004071079,0.000006275049,0.000002725766,0.000005700551,0.00001916674,1.317032e-7,0.9334509,0.000098802,0.0002683967,0.06199996],"study_design_scores_gemma":[0.0001799043,0.0004124796,0.8455195,0.00003419602,0.000002740351,0.000003345707,0.00006110088,0.0001400388,0.1427424,0.001970552,0.008822771,0.0001109891],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9961331,0.000112506,0.00003243114,0.00240469,0.00001797979,0.0001565849,0.00001601739,0.000005377542,0.001121259],"genre_scores_gemma":[0.9994105,0.00009427658,0.00005096374,0.0001796995,0.00006388182,0.00001440219,0.00003031342,5.814838e-7,0.0001554412],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8414484,"threshold_uncertainty_score":0.1296804,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04679124743235659,"score_gpt":0.3014147727424964,"score_spread":0.2546235253101398,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}