{"id":"W2166535160","doi":"10.1101/gr.4871006","title":"Sequencing and analysis of 10,967 full-length cDNA clones from<i>Xenopus laevis</i>and<i>Xenopus tropicalis</i>reveals post-tetraploidization transcriptome remodeling","year":2006,"lang":"en","type":"article","venue":"Genome Research","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":76,"is_retracted":false,"has_abstract":true,"ca_institutions":"Genome British Columbia","funders":"National Cancer Institute; National Institutes of Health; Lawrence Livermore National Laboratory; Michael Smith Health Research BC; National Human Genome Research Institute; U.S. Department of Energy","keywords":"Biology; Xenopus; Genetics; Subfunctionalization; Gene; Complementary DNA; Genome; Molecular biology; Gene family","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001390667,0.0004214544,0.0003522789,0.000510363,0.0003580432,0.0004092316,0.0002652632,0.0002356581,0.002431079],"category_scores_gemma":[0.0002388612,0.0001901871,0.0006203519,0.0005174386,0.0002002104,0.0003066571,0.0002081701,0.0004991255,0.001278675],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003045094,"about_ca_system_score_gemma":0.0002746759,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001332078,"about_ca_topic_score_gemma":0.002097511,"domain_scores_codex":[0.9998797,0.000006830375,0.00001342065,0.00004347354,0.00002765658,0.00002883203],"domain_scores_gemma":[0.9997383,0.00005889163,0.00006259741,0.00002729472,0.00004455199,0.000068414],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00007324601,0.00001078838,0.001001664,0.00006439008,0.000008055506,0.0000983748,0.00006261695,0.00003177279,0.9963882,0.00004700727,0.00007217476,0.002141679],"study_design_scores_gemma":[0.0000409864,0.0007050601,0.2451746,0.00008137574,0.0001674812,0.003491058,0.0007411854,0.001222726,0.7265164,0.0002191352,0.02158885,0.00005113796],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9763032,0.001397746,0.005096163,0.0001808414,0.00004589309,0.00006632275,0.01438823,0.0001508791,0.00237075],"genre_scores_gemma":[0.8452214,0.003989129,0.02504177,0.0004538912,0.00009054151,0.0002530112,0.1132814,0.0002838573,0.01138491],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002431079,"threshold_uncertainty_score":0.008132696,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03024494628718778,"score_gpt":0.2886007149339817,"score_spread":0.2583557686467939,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}