{"id":"W2166638314","doi":"10.1093/gbe/evr001","title":"Correlation between Nuclear Plastid DNA Abundance and Plastid Number Supports the Limited Transfer Window Hypothesis","year":2011,"lang":"en","type":"article","venue":"Genome Biology and Evolution","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":135,"is_retracted":false,"has_abstract":true,"ca_institutions":"Dalhousie University","funders":"Nanjing University of Posts and Telecommunications","keywords":"Plastid; Biology; Genome; Nuclear DNA; Mitochondrial DNA; Evolutionary biology; Nuclear gene; DNA; DNA sequencing; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001330791,0.0001470932,0.0001400053,0.00001900369,0.0002624956,0.000008742248,0.00006705781,0.0002014322,0.0000264868],"category_scores_gemma":[0.00002214485,0.000113413,0.0000386065,0.00004286831,0.0003189096,0.000002279376,0.00006349108,0.00007568668,0.00001453456],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000008856871,"about_ca_system_score_gemma":0.00001665516,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002497315,"about_ca_topic_score_gemma":0.00002005193,"domain_scores_codex":[0.9992195,0.00006767493,0.0001617055,0.0003056694,0.0000319039,0.0002135337],"domain_scores_gemma":[0.9996916,0.00003397452,0.00004212464,0.0001446874,0.00003381162,0.0000538242],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0002357913,0.00003488762,0.6498241,0.00001458291,0.0002079072,0.000001017392,0.000718774,0.00000936852,0.3467372,0.0005987362,0.0002313281,0.001386211],"study_design_scores_gemma":[0.0003121004,0.0002870911,0.990757,0.000003319241,0.00005678387,0.00002751048,0.00009586302,0.00001532378,0.001124048,0.0006341765,0.006532074,0.0001546833],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9969151,0.0009751278,0.0008650147,0.00007925516,0.0001274417,0.0001512046,0.00006273891,0.000006196729,0.0008179151],"genre_scores_gemma":[0.9988426,0.000538715,0.0002121554,0.00007591503,0.0001813838,0.00001095391,0.00004308827,0.00001388767,0.00008130735],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3456132,"threshold_uncertainty_score":0.4624847,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01476398154950196,"score_gpt":0.197565140250176,"score_spread":0.1828011587006741,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}