{"id":"W2166661460","doi":"10.1128/jcm.43.8.4083-4091.2005","title":"Genetic Diversity among Type <i>emm28</i> Group A <i>Streptococcus</i> Strains Causing Invasive Infections and Pharyngitis","year":2005,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Streptococcal Infections and Treatments","field":"Medicine","cited_by":60,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto","funders":"National Institute of Allergy and Infectious Diseases","keywords":"Prophage; Biology; Genetics; Gene; Virulence; Genetic variation; Genetic diversity; Hypervariable region; Amplicon; Population; Insertion sequence; Streptococcus pyogenes; Microbiology; Genome; Polymerase chain reaction; Bacteriophage; Escherichia coli; Bacteria; Transposable element","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002061007,0.0002096589,0.0002169065,0.0006513452,0.0001930208,0.0003239114,0.0002087394,0.0002166413,0.0005248614],"category_scores_gemma":[0.0005401727,0.0001387501,0.000162335,0.0003391622,0.0002774272,0.0001142993,0.000232401,0.0001907126,0.0001816068],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003142543,"about_ca_system_score_gemma":0.0001824233,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003553666,"about_ca_topic_score_gemma":0.004563018,"domain_scores_codex":[0.9997504,0.00003500786,0.00002049081,0.00008058786,0.00005806663,0.00005539214],"domain_scores_gemma":[0.9997244,0.00004674705,0.00009405047,0.0000304331,0.00004959605,0.00005479996],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0005193076,0.0001060588,0.6749362,0.00003150467,0.00008769183,0.0003981185,0.0007917272,0.0002654164,0.3167076,0.0001065284,0.000093929,0.005955813],"study_design_scores_gemma":[0.000006822066,0.0002018169,0.9942122,0.000004422744,0.00001602269,0.0006350941,0.0002822049,0.000264515,0.004067097,0.0000214485,0.0002831096,0.000005182565],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9997943,0.00001873053,0.00004358706,0.000003259329,3.963476e-7,0.000001444466,0.00004959026,7.6628e-7,0.00008792392],"genre_scores_gemma":[0.9991723,0.00003348905,0.0002049097,0.00001057487,0.000002266012,0.000004258455,0.000364101,0.000002098944,0.0002061144],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003553666,"threshold_uncertainty_score":0.007065952,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04617252623905962,"score_gpt":0.3471355625535634,"score_spread":0.3009630363145037,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}