{"id":"W2167164537","doi":"10.1139/cjm-2015-0079","title":"Diversity of endophytic and rhizoplane bacterial communities associated with exotic <i>Spartina alterniflora</i> and native mangrove using Illumina amplicon sequencing","year":2015,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Coastal wetland ecosystem dynamics","field":"Environmental Science","cited_by":66,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Natural Science Foundation of Ningbo; Royal Society of South Australia; State Scholarships Foundation; National Natural Science Foundation of China","keywords":"Spartina alterniflora; Biology; Proteobacteria; Firmicutes; Botany; Rhizosphere; Bacteroidetes; Planctomycetes; Ecology; Bacteria; Wetland; 16S ribosomal RNA; Marsh","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":true,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001729308,0.0002325336,0.0002038868,0.0007047451,0.0002026854,0.0003078273,0.0001287621,0.0001673739,0.0003062547],"category_scores_gemma":[0.0001673407,0.0001368069,0.0003148579,0.0005228972,0.000168883,0.0001756817,0.0002919885,0.0001673127,0.00008491819],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001223618,"about_ca_system_score_gemma":0.0001366861,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002696555,"about_ca_topic_score_gemma":0.004714521,"domain_scores_codex":[0.9997438,0.0000217494,0.00002517518,0.0001302378,0.00004587683,0.00003324567],"domain_scores_gemma":[0.9998571,0.00001770287,0.00005179823,0.000008785229,0.00003533721,0.00002930491],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001763265,0.00003478369,0.1157784,0.00007982274,0.00006013373,0.00007907695,0.0004550251,0.0001562448,0.8749925,0.00004903013,0.00004948136,0.008089135],"study_design_scores_gemma":[0.000005895114,0.0001476555,0.9709132,0.000009733341,0.00005569309,0.0002626695,0.000225269,0.001410574,0.02606735,0.00003385223,0.0008552705,0.0000128599],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9989042,0.00007066746,0.0003483745,0.000006324024,0.000001198163,0.000007089348,0.0004814867,0.000008403288,0.000172218],"genre_scores_gemma":[0.9944941,0.0001005602,0.002679452,0.00002566975,0.000003133248,0.00002703566,0.002213781,0.000007311775,0.0004489288],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002696555,"threshold_uncertainty_score":0.005361736,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03528618841155436,"score_gpt":0.1869534421747887,"score_spread":0.1516672537632343,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}