{"id":"W2167566248","doi":"10.1093/bioinformatics/btp595","title":"NAViGaTOR: Network Analysis, Visualization and Graphing Toronto","year":2009,"lang":"en","type":"article","venue":"Bioinformatics","topic":"Bioinformatics and Genomic Networks","field":"Biochemistry, Genetics and Molecular Biology","cited_by":273,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"University of Toronto; Ontario Genomics; Ontario Genomics Institute; Genome Canada","keywords":"Visualization; Computer science; Computer graphics (images); Data mining","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.004385944,0.00310528,0.002450476,0.006253331,0.001293613,0.004046976,0.004122001,0.001116706,0.1202316],"category_scores_gemma":[0.01183102,0.002144369,0.002086298,0.004914811,0.0008924344,0.005163002,0.004063152,0.004671825,0.05210913],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0009560283,"about_ca_system_score_gemma":0.002712589,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003692432,"about_ca_topic_score_gemma":0.004153736,"domain_scores_codex":[0.9973424,0.0005706768,0.0003261202,0.0007205353,0.0008548152,0.0001853959],"domain_scores_gemma":[0.9959196,0.00194183,0.0002918907,0.0008186297,0.0007633012,0.0002646728],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0002191586,0.00008079706,0.0009586278,0.002399703,0.0003154386,0.0003529401,0.000793286,0.004160727,0.006521843,0.02510111,0.8158508,0.1432454],"study_design_scores_gemma":[0.0003120946,0.00008165526,0.002088417,0.0006579742,0.0001391268,0.0006582516,0.0001860101,0.0453645,0.00894599,0.08593609,0.8554226,0.000207315],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"methods","genre_gemma":"software","genre_scores_codex":[0.001733328,0.001410697,0.4789608,0.001088371,0.0005114126,0.0007363189,0.1154761,0.3847231,0.01535993],"genre_scores_gemma":[0.01820711,0.002154079,0.7178182,0.0006354668,0.0002498176,0.004288205,0.1669746,0.07055382,0.01911878],"genre_candidate":"software","genre_consensus":null,"teacher_disagreement_score":0.1202316,"threshold_uncertainty_score":0.4022149,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.00527186983615427,"score_gpt":0.2430348237312061,"score_spread":0.2377629538950518,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}