{"id":"W2167731812","doi":"10.1083/jcb.201501081","title":"Open source software for quantification of cell migration, protrusions, and fluorescence intensities","year":2015,"lang":"en","type":"article","venue":"The Journal of Cell Biology","topic":"Cellular Mechanics and Interactions","field":"Biochemistry, Genetics and Molecular Biology","cited_by":178,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Canadian Institutes of Health Research; Cancer Research UK","keywords":"Beach morphodynamics; Cell migration; Population; Open source software; Computer science; Software; Filopodia; Biology; Cell; Programming language","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00232446,0.002350204,0.001923687,0.003741872,0.0007097445,0.001617291,0.002699998,0.001278065,0.05904854],"category_scores_gemma":[0.004194845,0.001684871,0.001994321,0.002121259,0.0006176226,0.001763231,0.00208183,0.002541713,0.02751686],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0007490087,"about_ca_system_score_gemma":0.00138877,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001308284,"about_ca_topic_score_gemma":0.002119701,"domain_scores_codex":[0.9985498,0.000101416,0.0002416943,0.0003194155,0.0006851052,0.0001026419],"domain_scores_gemma":[0.9974444,0.0009331877,0.0003532125,0.0004704339,0.000652478,0.000146282],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.001204691,0.000481837,0.00587593,0.004870458,0.0008454886,0.0007115618,0.0006739817,0.01388392,0.1485768,0.009914896,0.4134762,0.3994842],"study_design_scores_gemma":[0.0005383707,0.0003860949,0.02865251,0.0006053516,0.0004720777,0.002602572,0.0001266992,0.1686654,0.2383493,0.02094008,0.5378769,0.0007846444],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"methods","genre_gemma":"software","genre_scores_codex":[0.006406536,0.0003106438,0.516628,0.0001248361,0.0002359099,0.0005367739,0.03269773,0.4371538,0.005905821],"genre_scores_gemma":[0.03290229,0.0007756058,0.7079285,0.0005258793,0.0001760101,0.005652309,0.06777462,0.1614008,0.02286394],"genre_candidate":"software","genre_consensus":null,"teacher_disagreement_score":0.05904854,"threshold_uncertainty_score":0.197537,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03066348854651737,"score_gpt":0.2814894362569454,"score_spread":0.2508259477104281,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}