{"id":"W2168141663","doi":"10.3201/eid1108.040877","title":"HIV-1 Genetic Diversity in Antenatal Cohort, Canada","year":2005,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":33,"is_retracted":false,"has_abstract":true,"ca_institutions":"AIDS Vancouver; Jewish General Hospital; Institut National de Santé Publique du Québec; McGill University Health Centre; Université de Montréal; Centre Hospitalier Universitaire Sainte-Justine","funders":"Styrelsen för Internationellt Utvecklingssamarbete; Elizabeth Glaser Pediatric AIDS Foundation","keywords":"Clade; Genotyping; Phylogenetic tree; Cohort; Genetic diversity; Human immunodeficiency virus (HIV); Population; Medicine; Cohort study; Virology; Biology; Genotype; Genetics; Environmental health; Internal medicine; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002123151,0.000233682,0.0002447513,0.00107044,0.002082757,0.0008003237,0.0005712667,0.0002394062,0.001465995],"category_scores_gemma":[0.001295537,0.0002737833,0.0001611914,0.001678127,0.0004524745,0.0001661924,0.0004780655,0.0003780062,0.0001702533],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.009045236,"about_ca_system_score_gemma":0.007021633,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.9784661,"about_ca_topic_score_gemma":0.9851598,"domain_scores_codex":[0.9996567,0.00002214668,0.00001422833,0.00006332328,0.0001157002,0.0001279129],"domain_scores_gemma":[0.9993317,0.00003549713,0.00009060863,0.00002499367,0.0002881534,0.0002290324],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0000485701,0.00001339585,0.9940766,0.00001168563,0.00001533722,0.0002947759,0.0006905277,0.00006096181,0.000377831,0.00005299749,0.0005767509,0.003780501],"study_design_scores_gemma":[0.000006882906,0.00002580702,0.9974278,0.00001344315,0.00001062939,0.000320684,0.0009669202,0.0001926946,0.0001138049,0.00001440075,0.0009001559,0.000006805994],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9972478,0.0002302129,0.00004554738,0.00008009931,0.000003918287,0.0000206217,0.001489345,0.000004157779,0.0008782377],"genre_scores_gemma":[0.9981007,0.0002775303,0.0001175127,0.00006416918,0.000003816791,0.000009011957,0.0007089174,0.000002346121,0.0007160464],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02153391,"threshold_uncertainty_score":0.06562805,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.005991882343643003,"score_gpt":0.2196773957645874,"score_spread":0.2136855134209444,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}