{"id":"W2168157678","doi":"10.1186/jbiol23","title":"Motifs, themes and thematic maps of an integrated Saccharomyces cerevisiaeinteraction network","year":2005,"lang":"en","type":"article","venue":"Journal of Biology","topic":"Bioinformatics and Genomic Networks","field":"Biochemistry, Genetics and Molecular Biology","cited_by":191,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University; University of Toronto","funders":"National Human Genome Research Institute; Canadian Institutes of Health Research; Genome Canada; Howard Hughes Medical Institute; Harvard University; National Science Foundation","keywords":"Thematic map; Saccharomyces cerevisiae; Computational biology; Computer science; Evolutionary biology; Biology; Geography; Genetics; Cartography; Yeast","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002902394,0.0002037069,0.0001456037,0.002575557,0.0003136694,0.0006522146,0.0002605752,0.000177483,0.001775156],"category_scores_gemma":[0.001416111,0.0001217892,0.0002347984,0.002162422,0.0003828067,0.0008246271,0.0005061438,0.000212974,0.0001484736],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005361376,"about_ca_system_score_gemma":0.0003926816,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001968615,"about_ca_topic_score_gemma":0.002308572,"domain_scores_codex":[0.9997899,0.00004987489,0.00001293394,0.00005767783,0.00006502679,0.00002448424],"domain_scores_gemma":[0.9991651,0.0003378587,0.0001997755,0.00004723296,0.0001562185,0.00009389624],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"simulation_or_modeling","study_design_scores_codex":[0.001833988,0.0002914327,0.1987602,0.002973868,0.0005342941,0.003617644,0.01098545,0.1009392,0.1574918,0.1922764,0.01194428,0.3183515],"study_design_scores_gemma":[0.00009623835,0.0002933575,0.220174,0.000333076,0.000456081,0.003015047,0.006434039,0.4193983,0.0256187,0.269634,0.05444098,0.00010619],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8613236,0.0007835864,0.1261456,0.0004157163,0.00002215034,0.0001053301,0.004408487,0.0006400956,0.00615536],"genre_scores_gemma":[0.9227083,0.0003224637,0.07216547,0.00002774742,0.00001803563,0.0001013865,0.00353504,0.00005400732,0.001067538],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002575557,"threshold_uncertainty_score":0.00593847,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.007386111429027724,"score_gpt":0.2473040276530865,"score_spread":0.2399179162240588,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}