{"id":"W2168157678","doi":"10.1186/jbiol23","title":"Motifs, themes and thematic maps of an integrated Saccharomyces cerevisiaeinteraction network","year":2005,"lang":"en","type":"article","venue":"Journal of Biology","topic":"Bioinformatics and Genomic Networks","field":"Biochemistry, Genetics and Molecular Biology","cited_by":191,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University; University of Toronto","funders":"National Human Genome Research Institute; Canadian Institutes of Health Research; Genome Canada; Howard Hughes Medical Institute; Harvard University; National Science Foundation","keywords":"Thematic map; Saccharomyces cerevisiae; Computational biology; Computer science; Evolutionary biology; Biology; Geography; Genetics; Cartography; Yeast","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003186246,0.00009747657,0.0002299133,0.00004205671,0.00002789726,0.00001140436,0.0001347737,0.0001305739,0.00003421962],"category_scores_gemma":[0.00002949007,0.00006696473,0.00007050697,0.00004193705,0.00006893984,0.00001108886,0.00004034703,0.0001188083,0.000001264952],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000007122993,"about_ca_system_score_gemma":0.00003056213,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000003351047,"about_ca_topic_score_gemma":0.00001290282,"domain_scores_codex":[0.9992307,0.0000652024,0.000455489,0.00007975113,0.00003907975,0.0001298107],"domain_scores_gemma":[0.9992177,0.00002253976,0.000479808,0.000125013,0.00009925568,0.00005568094],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0007826848,0.0002827765,0.004000979,0.0001230349,0.0007480567,0.00000382866,0.0006461472,0.002941398,0.2922697,0.002066879,0.01626475,0.6798697],"study_design_scores_gemma":[0.008084041,0.01631883,0.006774884,0.001047335,0.0006252644,0.00451926,0.005610539,0.02937817,0.1583332,0.03082887,0.7367421,0.001737473],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9865198,0.004236503,0.008189694,0.0002940838,0.0002466054,0.00008242804,0.00001274468,0.00000267638,0.0004155278],"genre_scores_gemma":[0.9893667,0.0007388315,0.009018564,0.0001575852,0.0006139377,6.828344e-7,0.00003327397,0.000007324441,0.00006311381],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7204774,"threshold_uncertainty_score":0.2730742,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.007386111429027724,"score_gpt":0.2473040276530865,"score_spread":0.2399179162240588,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}