{"id":"W2168547182","doi":"10.3201/eid1804.111803","title":"Genomic Analysis of<i>emm59</i>Group A<i>Streptococcus</i>Invasive Strains, United States","year":2012,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Streptococcal Infections and Treatments","field":"Medicine","cited_by":29,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Canadian Institutes of Health Research; Centers for Disease Control and Prevention; Minnesota Department of Health","keywords":"Streptococcus; Biology; Streptococcus pneumoniae; Group A; Cluster (spacecraft); Streptococcus pyogenes; Genetics; Genotype; Microbiology; Medicine; Gene; Bacteria; Internal medicine","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00008913262,0.000298713,0.0005902189,0.001158254,0.0001868623,0.00002396726,0.00006471758,0.00007849565,0.001055593],"category_scores_gemma":[0.0001277784,0.0002640366,0.0005846147,0.002185634,0.0001293411,0.0001691969,0.00005308205,0.0001293303,0.00005282889],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001792797,"about_ca_system_score_gemma":0.00006785827,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0007999105,"about_ca_topic_score_gemma":0.00009138424,"domain_scores_codex":[0.9984347,0.00008241653,0.0004377173,0.0003125185,0.0002392301,0.0004934325],"domain_scores_gemma":[0.9985557,0.0001731681,0.0002205317,0.0004527606,0.0001626429,0.0004351615],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00003016875,0.001674956,0.9872974,0.00007710404,0.005647107,0.0000113824,0.0002954588,0.001289758,0.001243812,0.0002514614,0.0005985749,0.001582867],"study_design_scores_gemma":[0.001365496,0.0002923563,0.9843566,0.00005552135,0.008858664,0.00001021092,0.0003108176,0.0003733909,0.0005980731,0.00006192312,0.003470037,0.0002468641],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.995787,0.001057691,0.0003172269,0.00004721552,0.0002526451,0.0005785166,0.0003271771,0.0002804543,0.001352116],"genre_scores_gemma":[0.9970083,0.0004140126,0.00005154843,0.0002666363,0.0001800332,0.0001614797,0.001756887,0.0000396398,0.0001215282],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003211557,"threshold_uncertainty_score":0.9999812,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01360056532577036,"score_gpt":0.2846047034011602,"score_spread":0.2710041380753899,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}