{"id":"W2169555805","doi":"10.1111/1462-2920.12883","title":"Genome analyses suggest the presence of polyploidy and recent human‐driven expansions in eight global populations of the honeybee pathogen <scp> <i>N</i> </scp> <i>osema ceranae</i>","year":2015,"lang":"en","type":"article","venue":"Environmental Microbiology","topic":"Insect and Pesticide Research","field":"Agricultural and Biological Sciences","cited_by":96,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Ottawa; Canadian Institute for Advanced Research","funders":"Ontario Ministry of Research and Innovation; Natural Sciences and Engineering Research Council of Canada; Ontario Ministry of Research, Innovation and Science; Canadian Institute for Advanced Research","keywords":"Biology; Nosema ceranae; Genome; Population; Genetics; Phylogenetic tree; Genetic diversity; Population genomics; Evolutionary biology; Polyploid; Nosema; Zoology; Genomics; Gene; Microsporidia; Spore","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002040297,0.0001716005,0.0001925898,0.0005960069,0.0002386313,0.0003413269,0.0001715817,0.0003046055,0.0008518411],"category_scores_gemma":[0.0002901412,0.0001100225,0.0002658376,0.0004788467,0.0002899612,0.0001635735,0.0003178477,0.0003829777,0.0001332981],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001889109,"about_ca_system_score_gemma":0.0001532505,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0009748953,"about_ca_topic_score_gemma":0.002978886,"domain_scores_codex":[0.9998828,0.00001075083,0.000009092993,0.00005918388,0.00002121038,0.0000170158],"domain_scores_gemma":[0.9997236,0.00005078581,0.0001244551,0.00003397737,0.00002992921,0.00003726847],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0005327569,0.00006206454,0.486821,0.0001351005,0.0002020403,0.0006799955,0.001145022,0.0002811618,0.482821,0.0002750568,0.0001475451,0.02689733],"study_design_scores_gemma":[0.000006736807,0.00009434623,0.9910219,0.000008378744,0.0000570604,0.00103976,0.0003474101,0.0002044757,0.005869379,0.00008622956,0.001257201,0.000007033514],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9986084,0.0002181516,0.0004745891,0.00002710227,0.000002916159,0.0000084969,0.00027087,0.000006307113,0.0003831954],"genre_scores_gemma":[0.9982876,0.0001234631,0.000792024,0.00002763439,0.000003079211,0.000006213051,0.0005660437,0.000003018977,0.000190883],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0009748953,"threshold_uncertainty_score":0.002849698,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05638191279867824,"score_gpt":0.2792922376764402,"score_spread":0.2229103248777619,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}