{"id":"W2169749255","doi":"10.1128/jcm.41.8.3784-3789.2003","title":"Vaginal Swabs Are Appropriate Specimens for Diagnosis of Genital Tract Infection with <i>Chlamydia trachomatis</i>","year":2003,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":175,"is_retracted":false,"has_abstract":true,"ca_institutions":"McMaster University; St. Joseph’s Healthcare Hamilton","funders":"","keywords":"Nucleic Acid Amplification Tests; Chlamydia trachomatis; Medicine; Asymptomatic; Chlamydia; Sexually transmitted disease; Sex organ; Ligase chain reaction; Vagina; Chlamydia trachomatis infection; Trichomoniasis; Internal medicine; Gynecology; Virology; Polymerase chain reaction; Surgery; Immunology; Biology; Syphilis","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000820923,0.0004549927,0.0004932074,0.0005628556,0.0003153684,0.0004921274,0.0002861327,0.0004170978,0.00173176],"category_scores_gemma":[0.00272523,0.0002473987,0.0001535732,0.0004434245,0.0002889222,0.0002817438,0.0002274526,0.0001988025,0.000781081],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001674915,"about_ca_system_score_gemma":0.0002722857,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001379428,"about_ca_topic_score_gemma":0.003161127,"domain_scores_codex":[0.9990595,0.0003656375,0.0001546892,0.0001240327,0.0002098337,0.00008625153],"domain_scores_gemma":[0.9984639,0.0004045252,0.0005732336,0.00009684513,0.0003266489,0.0001349274],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001211138,0.0004306892,0.8307808,0.0007817986,0.000116256,0.0021204,0.0006855974,0.0001680654,0.06487798,0.0001660387,0.002900123,0.09576105],"study_design_scores_gemma":[0.0001387391,0.004267295,0.9036006,0.0005146408,0.0001333499,0.01501804,0.001956868,0.0005457847,0.04703045,0.0002109622,0.02652736,0.00005583259],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9777109,0.008247952,0.004385572,0.0003167879,0.0001452152,0.0004624207,0.001829391,0.0001600533,0.006741705],"genre_scores_gemma":[0.9787652,0.004189798,0.01246706,0.0003859118,0.00009907559,0.0001475466,0.001881122,0.00003421754,0.002030125],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.00173176,"threshold_uncertainty_score":0.005793273,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05181126584998693,"score_gpt":0.3623928573664074,"score_spread":0.3105815915164205,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}