{"id":"W2170484620","doi":"10.1534/genetics.109.105155","title":"Alternative Splicing of PTC7 in<i>Saccharomyces cerevisiae</i>Determines Protein Localization","year":2009,"lang":"en","type":"article","venue":"Genetics","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":84,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto","funders":"National Human Genome Research Institute; National Institutes of Health","keywords":"Biology; RNA splicing; Saccharomyces cerevisiae; Intron; Alternative splicing; Proteome; Eukaryote; Genetics; Cell biology; Gene; Exonic splicing enhancer; Computational biology; Messenger RNA; Genome; RNA","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001109451,0.0002065323,0.0001396588,0.000184708,0.0001282102,0.0003560515,0.0001737112,0.000199699,0.0005635416],"category_scores_gemma":[0.0001741189,0.0001221417,0.0002456284,0.0001177632,0.0002936451,0.0001152423,0.0001947299,0.0003264974,0.0005856175],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003009886,"about_ca_system_score_gemma":0.0002432892,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0007620901,"about_ca_topic_score_gemma":0.001594144,"domain_scores_codex":[0.9999104,0.00001107966,0.000009302298,0.00002298247,0.00003069427,0.00001557777],"domain_scores_gemma":[0.9998254,0.00004237162,0.00004384674,0.00002669474,0.00003221612,0.00002948473],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00002404126,0.000002914212,0.0003472551,0.00001004552,0.000001645553,0.0001681238,0.00001480423,0.00003365354,0.9981407,0.000278071,0.00002465325,0.0009541406],"study_design_scores_gemma":[0.000005132668,0.00004377884,0.003267723,0.000004232838,0.00001230895,0.0005149716,0.00005021203,0.000729332,0.9923277,0.0001905362,0.002846368,0.0000076454],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.990054,0.0003987068,0.007650109,0.00007909485,0.00003351039,0.00000988787,0.0002373012,0.0001190501,0.001418245],"genre_scores_gemma":[0.9938903,0.0002300432,0.003915366,0.00004583981,0.00001009008,0.000008614975,0.0006062376,0.00008225381,0.001211364],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0007620901,"threshold_uncertainty_score":0.002183855,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01254618111019933,"score_gpt":0.2818019108893122,"score_spread":0.2692557297791129,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}