{"id":"W2170543480","doi":"10.3201/eid1108.041354","title":"<i>Coxiella burnetii</i> Genotyping","year":2005,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":252,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Alberta","funders":"Irkutsk State University","keywords":"Coxiella burnetii; Q fever; Genotyping; Biology; Typing; Multilocus sequence typing; Rickettsiaceae; Intergenic region; Phylogenetic tree; Genetics; Molecular epidemiology; Rickettsiales; Genotype; Virology; Microbiology; Gene; Genome","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004643659,0.0002629724,0.0003164716,0.0008436261,0.0002727411,0.0003875687,0.0001862533,0.0003047647,0.002139519],"category_scores_gemma":[0.001212478,0.00009897316,0.000191202,0.0007386749,0.0001964241,0.0001176893,0.0001769266,0.0002471506,0.0006663507],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002282698,"about_ca_system_score_gemma":0.0001792181,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.004320842,"about_ca_topic_score_gemma":0.004297141,"domain_scores_codex":[0.9993697,0.0001295875,0.00008924761,0.0001390149,0.000154617,0.0001178386],"domain_scores_gemma":[0.9991872,0.0001732244,0.0002591209,0.00006325021,0.0002353505,0.00008186678],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.001056837,0.0001743179,0.3686785,0.0003235478,0.00005532806,0.001338597,0.0005440381,0.0006157625,0.5764276,0.0003292864,0.003766251,0.04668998],"study_design_scores_gemma":[0.00003268347,0.0007681205,0.6981017,0.0001274105,0.00008676629,0.005381375,0.0004838425,0.002057765,0.2716131,0.0002192889,0.0210888,0.00003902439],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9751666,0.0007581632,0.008550112,0.0002993777,0.0000425082,0.0002753209,0.006728071,0.0002005181,0.007979444],"genre_scores_gemma":[0.96962,0.0004686126,0.01876321,0.0003833341,0.00003106761,0.0002085545,0.00664418,0.00005240193,0.003828761],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.004320842,"threshold_uncertainty_score":0.008591354,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.005687837333241672,"score_gpt":0.2642784009477214,"score_spread":0.2585905636144797,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}