{"id":"W2170645178","doi":"10.1093/molbev/msi065","title":"Impact of Taxon Sampling on the Estimation of Rates of Evolution at Sites","year":2004,"lang":"en","type":"article","venue":"Molecular Biology and Evolution","topic":"Plant and animal studies","field":"Agricultural and Biological Sciences","cited_by":31,"is_retracted":false,"has_abstract":true,"ca_institutions":"Dalhousie University; Canadian Institute for Advanced Research","funders":"Natural Sciences and Engineering Research Council of Canada; Genome Atlantic","keywords":"Biology; Taxon; Evolutionary biology; Sampling (signal processing); Estimation; Ecology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.08591574,0.0009597282,0.00136241,0.001285459,0.001506935,0.002074467,0.001247325,0.001371265,0.0007928768],"category_scores_gemma":[0.2710206,0.0007519291,0.001427276,0.001682009,0.002889857,0.002015059,0.002025861,0.001817537,0.0003177465],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001780747,"about_ca_system_score_gemma":0.001387761,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01180771,"about_ca_topic_score_gemma":0.008800596,"domain_scores_codex":[0.9248363,0.06262085,0.002833797,0.00421436,0.004475304,0.001019218],"domain_scores_gemma":[0.597066,0.3620605,0.01276853,0.02202728,0.004968515,0.001109147],"domain_codex":null,"domain_gemma":"methods","domain_candidate":"methods","domain_consensus":null,"study_design_codex":"simulation_or_modeling","study_design_gemma":"simulation_or_modeling","study_design_scores_codex":[0.003786647,0.0002866809,0.3514517,0.0006154552,0.002197714,0.0007444799,0.002802355,0.5128307,0.01721025,0.01338907,0.001174338,0.09351059],"study_design_scores_gemma":[0.0003482428,0.0009079222,0.1440544,0.0003415577,0.0006533328,0.001264743,0.0008676941,0.8085111,0.01854929,0.02103926,0.003234067,0.0002283665],"study_design_candidate":"simulation_or_modeling","study_design_consensus":"simulation_or_modeling","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.7780311,0.001540032,0.2146028,0.001184558,0.0001328481,0.0003224907,0.0004331284,0.0006285754,0.003124526],"genre_scores_gemma":[0.9510618,0.000252071,0.04718712,0.0003575879,0.00003434978,0.000140524,0.0004863147,0.0001644461,0.0003157831],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9140843,"threshold_uncertainty_score":0.4543713,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03879991850276729,"score_gpt":0.2737211810853937,"score_spread":0.2349212625826264,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}