{"id":"W2170660255","doi":"10.1093/mutage/geq096","title":"Early host cell reactivation of an oxidatively damaged adenovirus-encoded reporter gene requires the Cockayne syndrome proteins CSA and CSB","year":2010,"lang":"en","type":"article","venue":"Mutagenesis","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"ca_institutions":"McMaster University","funders":"National Cancer Institute; McMaster University","keywords":"Reporter gene; Molecular biology; Biology; Cockayne syndrome; Gene expression; Chinese hamster ovary cell; Gene; DNA repair; Cell culture; Nucleotide excision repair; Biochemistry; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004540647,0.0001878041,0.0001857827,0.00005395475,0.0001273441,0.00003869594,0.0002486407,0.0002029761,0.00002972714],"category_scores_gemma":[0.0001330717,0.0001483597,0.00006405693,0.00008994765,0.000144796,0.0000224031,0.0001371512,0.0001175857,0.000003119562],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000007856195,"about_ca_system_score_gemma":0.0000643368,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001738908,"about_ca_topic_score_gemma":0.00006834129,"domain_scores_codex":[0.998703,0.00012486,0.000308476,0.0004507836,0.000207096,0.0002057948],"domain_scores_gemma":[0.9987001,0.0000192342,0.0002920283,0.0007774545,0.0001265493,0.0000845849],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00007522003,0.00008877848,0.001316854,0.00002014162,0.000039975,0.00002363806,0.0001592421,0.000001234314,0.9975857,0.00003049791,0.00001918749,0.0006395819],"study_design_scores_gemma":[0.0003147833,0.0004716827,0.07805992,0.000006428671,0.00003932094,0.00009307488,0.00008397143,0.00001980034,0.920321,0.00006476699,0.000352902,0.000172347],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9982343,0.00005588769,0.0006229322,0.00008007422,0.0001087322,0.0005281787,0.00003832957,0.00002566255,0.0003058815],"genre_scores_gemma":[0.9942297,0.00001578476,0.004849693,0.00006554709,0.00007899258,0.0000736456,0.00006807879,0.00003959842,0.0005789115],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.07726464,"threshold_uncertainty_score":0.6049932,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.008771863592653016,"score_gpt":0.2258430591114511,"score_spread":0.2170711955187981,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}