{"id":"W2170698118","doi":"10.1093/cid/cis737","title":"Outbreak of Carbapenem-Resistant Enterobacteriaceae Containing blaNDM-1, Ontario, Canada","year":2012,"lang":"en","type":"article","venue":"Clinical Infectious Diseases","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":102,"is_retracted":false,"has_abstract":true,"ca_institutions":"McMaster University; Public Health Ontario; University of Toronto; Toronto Public Health; William Osler Health System","funders":"","keywords":"Klebsiella pneumoniae; Outbreak; Enterobacteriaceae; Microbiology; Typing; Plasmid; Carbapenem-resistant enterobacteriaceae; Isolation (microbiology); Medicine; Infection control; Multilocus sequence typing; Escherichia coli; Virology; Biology; Genotype; Intensive care medicine; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000207057,0.0001988886,0.000388164,0.0000199549,0.00006552769,0.0000191983,0.0001733169,0.0001422803,0.0002094627],"category_scores_gemma":[0.0004072989,0.0001827699,0.0001997559,0.00004787408,0.0001757769,0.0000090135,0.0001337645,0.0001066254,0.000004972124],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001034768,"about_ca_system_score_gemma":0.0007871916,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.2019167,"about_ca_topic_score_gemma":0.8042945,"domain_scores_codex":[0.9984171,0.0001452196,0.0006141529,0.0002972783,0.0001505002,0.0003757691],"domain_scores_gemma":[0.9987544,0.00009948463,0.0002787077,0.0004426727,0.0001074588,0.0003172983],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0002293709,0.0002742616,0.9901925,0.00002779179,0.0001605312,0.000003879543,0.00001642289,0.000002354868,0.006152046,0.00004868703,0.002699011,0.0001931486],"study_design_scores_gemma":[0.0007053432,0.0003461468,0.9724699,0.00003536844,0.00009805344,0.0000033332,0.00004737404,6.880009e-7,0.001062895,0.00001441154,0.02500935,0.0002070887],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9960585,0.0004756867,0.00004833462,0.00001728484,0.00124101,0.0001585955,0.0001055139,0.00001649653,0.001878639],"genre_scores_gemma":[0.9984689,0.00006452399,0.00002349856,0.0003246815,0.0004949406,0.000007418194,0.0001561843,0.00002510799,0.0004346939],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6023778,"threshold_uncertainty_score":0.8033978,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0152708170847295,"score_gpt":0.2839888340726562,"score_spread":0.2687180169879267,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}