{"id":"W2170904612","doi":"10.1098/rspb.2011.0599","title":"A stem-deuterostome origin of the vertebrate pharyngeal transcriptional network","year":2011,"lang":"en","type":"article","venue":"Proceedings of the Royal Society B Biological Sciences","topic":"Developmental Biology and Gene Regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":105,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Natural Sciences and Engineering Research Council of Canada; National Science Foundation","keywords":"Biology; Endoderm; Vertebrate; Anatomy; Mesoderm; Ectoderm; Brachyury; Neural crest; Pharyngeal pouch; Mesenchyme; Embryo; Genetics; Embryogenesis; Embryonic stem cell; Gene","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00005718448,0.0001170513,0.0001187984,0.0001835405,0.0002033647,0.0004152982,0.0001334611,0.0001795162,0.001713091],"category_scores_gemma":[0.00006342123,0.0001505315,0.0001548921,0.000126831,0.000282246,0.0003874283,0.000283685,0.0002824819,0.0009824623],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004003873,"about_ca_system_score_gemma":0.0002806858,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0008671543,"about_ca_topic_score_gemma":0.002360284,"domain_scores_codex":[0.9999399,0.000003785765,0.000002174751,0.00002980829,0.00001231601,0.00001209246],"domain_scores_gemma":[0.9999573,0.000005561978,0.000007166856,0.000006499759,0.000009600234,0.00001376925],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00003519757,0.000004478728,0.001475567,0.00005901547,0.00000483946,0.00006180653,0.00005636712,0.0001161227,0.9863065,0.003736502,0.0001623129,0.007981255],"study_design_scores_gemma":[0.0000450673,0.0001770848,0.3324747,0.00009976995,0.00006320438,0.001106672,0.0003757519,0.006352424,0.5891505,0.006233672,0.06389371,0.00002739046],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9381113,0.006008147,0.01957342,0.0005709898,0.00006571933,0.00003078364,0.0009226832,0.0003274642,0.03438947],"genre_scores_gemma":[0.9831268,0.00212841,0.004917164,0.0001103906,0.00001991382,0.00001823735,0.001197296,0.00002881786,0.008453058],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001713091,"threshold_uncertainty_score":0.005730867,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03913475877144469,"score_gpt":0.2335156783890922,"score_spread":0.1943809196176475,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}