{"id":"W2170921364","doi":"10.1128/jcm.40.11.4021-4029.2002","title":"Genetic Characterization and Sequence Heterogeneity of a Canadian Isolate of Swine Hepatitis E Virus","year":2002,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Hepatitis Viruses Studies and Epidemiology","field":"Medicine","cited_by":62,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph","funders":"Health Canada","keywords":"Hepatitis E virus; ORFS; Biology; Virology; Genotype; Phylogenetic tree; Strain (injury); Sequence analysis; Caliciviridae; Nucleic acid sequence; Virus; Genetics; Open reading frame; Gene; Peptide sequence; Viral disease","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005928248,0.00009943319,0.001053842,0.0002136121,0.00002575099,0.000001337687,0.00007917892,0.0002212705,0.000162063],"category_scores_gemma":[0.001155417,0.00007672707,0.0001802469,0.0001346949,0.0003329374,0.0000304705,0.00003310165,0.0002462994,0.000005227843],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002482365,"about_ca_system_score_gemma":0.00009001488,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.02141881,"about_ca_topic_score_gemma":0.04316316,"domain_scores_codex":[0.9976777,0.0002552434,0.001700066,0.0001345115,0.00003066659,0.0002018566],"domain_scores_gemma":[0.9981205,0.0003095827,0.0009543463,0.0001306468,0.0002797684,0.0002051142],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00008676189,0.00007018629,0.7106609,0.00003712725,0.0001468981,0.00003769721,0.0000440865,0.000001384669,0.2825829,0.000008787228,0.0003168717,0.006006376],"study_design_scores_gemma":[0.001042154,0.002360136,0.97531,0.0001088249,0.0001214357,0.000917191,0.000003320158,0.0001823233,0.001498859,0.00001875231,0.01836541,0.00007161985],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9967386,0.0009333335,0.0001910333,0.001540521,0.0003491328,0.00009192616,0.000105027,0.000001932198,0.00004853944],"genre_scores_gemma":[0.9359524,0.06090048,0.001442296,0.001482861,0.0001854025,6.09492e-7,0.000005039748,0.000007608078,0.00002327603],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.281084,"threshold_uncertainty_score":0.9850976,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.1351939541526251,"score_gpt":0.3663015490609021,"score_spread":0.231107594908277,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}