{"id":"W2171146936","doi":"10.1186/1741-7007-4-12","title":"The complete plastid genome sequence of the parasitic green alga Helicosporidium sp. is highly reduced and structured","year":2006,"lang":"en","type":"article","venue":"BMC Biology","topic":"Protist diversity and phylogeny","field":"Biochemistry, Genetics and Molecular Biology","cited_by":128,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"Canadian Institutes of Health Research; Michael Smith Health Research BC; Canadian Institute for Advanced Research","keywords":"Plastid; Biology; Genome; Gene; Genetics; Chloroplast","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009104771,0.0001195678,0.0001285942,0.00001218044,0.0001979902,0.000008557951,0.0003370561,0.0001488453,0.000007639846],"category_scores_gemma":[0.00002726802,0.00007531283,0.00006554884,0.00005584537,0.0004852118,0.000001529348,0.0001501204,0.00007499084,0.000003231182],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000007740581,"about_ca_system_score_gemma":0.00005723834,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003651087,"about_ca_topic_score_gemma":0.0002360094,"domain_scores_codex":[0.999226,0.0001029179,0.0001566921,0.0002506892,0.00005125304,0.0002123909],"domain_scores_gemma":[0.9994433,0.00004155398,0.0001117135,0.0003226448,0.00004970652,0.00003107718],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00007052702,0.000007875215,0.04837417,0.00001172368,0.00002493928,5.154088e-7,0.00001792174,0.000006040005,0.9502789,0.0007889358,0.0003381915,0.00008021582],"study_design_scores_gemma":[0.0005063839,0.00023659,0.6706695,0.000005053811,0.00003169968,0.00004278134,0.00002262072,0.00002308406,0.2955217,0.002568589,0.03018691,0.0001850213],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9975103,0.0009754117,0.00008480655,0.0003430867,0.0002188879,0.0001931064,0.0004986849,0.000004986168,0.0001707695],"genre_scores_gemma":[0.9989491,0.00006517783,0.000164891,0.0002288973,0.0001541761,0.000005607543,0.0001306954,0.000006285672,0.0002952113],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6547572,"threshold_uncertainty_score":0.3071168,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.017739781578179,"score_gpt":0.2309789412310613,"score_spread":0.2132391596528823,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}