{"id":"W2171209541","doi":"10.1016/j.ympev.2006.03.006","title":"Seed plant phylogeny: Gnetophytes are derived conifers and a sister group to Pinaceae","year":2006,"lang":"en","type":"article","venue":"Molecular Phylogenetics and Evolution","topic":"Botany and Geology in Latin America and Caribbean","field":"Agricultural and Biological Sciences","cited_by":58,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of Ottawa","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Gymnosperm; Pinaceae; Monophyly; Phylogenetics; Phylogenetic tree; Sister group; Botany; Evolutionary biology; Chloroplast DNA; Gene; Pinus <genus>; Genetics; Clade","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006626051,0.0001485428,0.000158694,0.00001269446,0.0001886258,0.00003944177,0.00006710139,0.0001035905,0.00001333477],"category_scores_gemma":[0.000008251007,0.0000757735,0.0000442357,0.0001338317,0.0001287764,0.00001695316,0.00006728013,0.00006165411,0.000004070035],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000111995,"about_ca_system_score_gemma":0.000002364156,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001921007,"about_ca_topic_score_gemma":0.0003420108,"domain_scores_codex":[0.9991558,0.00005694197,0.0001398383,0.0003026834,0.00009547092,0.0002493151],"domain_scores_gemma":[0.9997338,0.000028306,0.00005829885,0.00005113966,0.0000340063,0.00009442039],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00002639375,0.00003302496,0.09528993,0.000005162298,0.00001069553,0.000008760763,0.00001560562,0.00002828198,0.9005333,0.001045624,0.00006836387,0.002934908],"study_design_scores_gemma":[0.0001564048,0.0003320535,0.9897799,0.00001245986,0.00002529782,0.00002042988,0.0001186195,0.0001815695,0.005282419,0.002245377,0.001642136,0.0002033719],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9966317,0.001756752,0.0003251894,0.000712287,0.00006157332,0.000161258,0.00004960537,0.00002356825,0.0002780958],"genre_scores_gemma":[0.9989511,0.00004790548,0.0002935413,0.0005033548,0.0001036831,0.0000156669,0.00004411629,0.000001531527,0.00003907927],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8952509,"threshold_uncertainty_score":0.3089953,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.003664940147287569,"score_gpt":0.1614546324149531,"score_spread":0.1577896922676655,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}