{"id":"W2171267972","doi":"10.1128/aac.00120-14","title":"Comparative Genomic Analysis of KPC-Encoding pKpQIL-Like Plasmids and Their Distribution in New Jersey and New York Hospitals","year":2014,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":110,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto; Mount Sinai Hospital","funders":"Geriatric Research Education and Clinical Center; National Institutes of Health; National Institute of Allergy and Infectious Diseases; U.S. Department of Veterans Affairs","keywords":"Plasmid; Klebsiella pneumoniae; Enterobacter aerogenes; Escherichia coli; Microbiology; Biology; Enterobacteriaceae; Clinical microbiology; Gene; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009312703,0.0001687434,0.0003573164,0.00005160092,0.0000477246,0.0000402969,0.00008005281,0.0001111121,0.00001479873],"category_scores_gemma":[0.000006003343,0.000146261,0.00005811198,0.000129808,0.0001262874,0.000007379881,0.00004497583,0.00004745287,3.760464e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000009699549,"about_ca_system_score_gemma":0.0000299874,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000214573,"about_ca_topic_score_gemma":0.0001540474,"domain_scores_codex":[0.9992262,0.00003351787,0.0002194401,0.0003177799,0.00003875877,0.0001642922],"domain_scores_gemma":[0.999625,0.00001409953,0.0001197585,0.0001456719,0.00001762137,0.00007782798],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0002331153,0.00005204368,0.4020701,0.00002769174,0.000528331,4.535641e-7,0.001086971,0.00002947606,0.5831935,0.00005889489,0.009049613,0.003669854],"study_design_scores_gemma":[0.001647493,0.0001761298,0.8691999,0.00005305316,0.0001049267,0.000003736328,0.0002495076,0.0004901111,0.1119304,0.00005073978,0.01579346,0.0003005616],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9975519,0.000185795,0.001771336,0.0002124374,0.00004506049,0.0001188462,0.00004907549,0.000003984662,0.00006151884],"genre_scores_gemma":[0.9969828,0.001710245,0.0003422315,0.0004971496,0.00005959353,3.630076e-7,0.0002033137,0.00001051921,0.0001938189],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4712631,"threshold_uncertainty_score":0.596435,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01491914459351948,"score_gpt":0.246620972126266,"score_spread":0.2317018275327465,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}