{"id":"W2171315640","doi":"10.1128/ec.00312-12","title":"Complete Genome Sequences from Three Genetically Distinct Strains Reveal High Intraspecies Genetic Diversity in the Microsporidian Encephalitozoon cuniculi","year":2013,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Parasitic Infections and Diagnostics","field":"Immunology and Microbiology","cited_by":62,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia; Canadian Institute for Advanced Research","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; U.S. Department of Health and Human Services; National Institutes of Health; Compute Canada; Health Canada; U.S. Public Health Service; Canadian Institute for Advanced Research","keywords":"Biology; Encephalitozoon cuniculi; Genetics; Genome; Genetic diversity; Intergenic region; Nonsynonymous substitution; Genetic variation; Comparative genomics; Gene; Genomics; Microsporidia; Evolutionary biology; Population","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001274683,0.0003305168,0.0003318001,0.000675744,0.0002537375,0.0002571059,0.0002170718,0.0002873591,0.0004244383],"category_scores_gemma":[0.0004671539,0.0001256609,0.0002642487,0.0006357206,0.0002184115,0.0001331936,0.0003146662,0.000360588,0.0001597319],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002012473,"about_ca_system_score_gemma":0.0002171902,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001790065,"about_ca_topic_score_gemma":0.003643892,"domain_scores_codex":[0.9998772,0.00001253816,0.00001398561,0.00004001971,0.00003272839,0.00002354494],"domain_scores_gemma":[0.9996175,0.0001045893,0.0001044835,0.00004592066,0.00005323935,0.00007428064],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003021281,0.00002612853,0.01415777,0.00009638121,0.00004844877,0.0002158251,0.0002371591,0.0001710068,0.9784852,0.0001026249,0.00005948904,0.006097883],"study_design_scores_gemma":[0.00003244269,0.0002086417,0.9016649,0.00002998933,0.0001907712,0.00144067,0.0002773898,0.0009860785,0.09002233,0.0001629142,0.00495151,0.00003239829],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9959026,0.0004122098,0.001119415,0.00001868447,0.000003934027,0.00001191866,0.002161549,0.00001897858,0.0003507516],"genre_scores_gemma":[0.9782421,0.0003716812,0.005298655,0.00006808355,0.000005417727,0.00003766548,0.01555593,0.00002730685,0.0003932074],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001790065,"threshold_uncertainty_score":0.003559232,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01925847683569717,"score_gpt":0.2122899334598075,"score_spread":0.1930314566241104,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}