{"id":"W2171376927","doi":"10.1093/molbev/msu147","title":"Paralogous Radiations of PIN Proteins with Multiple Origins of Noncanonical PIN Structure","year":2014,"lang":"en","type":"article","venue":"Molecular Biology and Evolution","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":146,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Alberta; University of British Columbia","funders":"Isaac Newton Trust; Natural Environment Research Council; Alberta Innovates; Joint Genome Institute; Sight Research UK; Biotechnology and Biological Sciences Research Council; Alberta Innovates - Technology Futures","keywords":"Biology; Neofunctionalization; Phylogenetics; Clade; Evolutionary biology; Phylogenetic tree; Bilateria; Plant evolution; Convergent evolution; Gene duplication; Lineage (genetic); Protein family; Genetics; Gene; Genome","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002938969,0.0002320174,0.0003099,0.0008564742,0.0004541505,0.0004374876,0.0002981511,0.0004607352,0.0009650513],"category_scores_gemma":[0.0003761879,0.0002362027,0.0002445488,0.0005403774,0.000548108,0.0004904708,0.0008530765,0.0007112998,0.0004459352],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002470771,"about_ca_system_score_gemma":0.0002266283,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002880682,"about_ca_topic_score_gemma":0.0005187785,"domain_scores_codex":[0.9997463,0.00002240402,0.00001592888,0.0001110888,0.00005534312,0.0000489372],"domain_scores_gemma":[0.9996073,0.00006817404,0.0001203663,0.00007832317,0.00004318051,0.00008283051],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0003565379,0.00006522039,0.0673966,0.00008316079,0.00006617345,0.0007958195,0.0005954305,0.0001895646,0.9159719,0.001046365,0.00007385697,0.01335933],"study_design_scores_gemma":[0.00003401007,0.000228512,0.9596438,0.00002332332,0.00008022099,0.004756927,0.0005181937,0.001180559,0.02759398,0.001213061,0.004693097,0.00003427695],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9975374,0.0004395776,0.001073707,0.00002868663,0.000003541892,0.000008451511,0.00008400442,0.00002434289,0.0008002135],"genre_scores_gemma":[0.9974946,0.0002619372,0.001062034,0.00008009232,0.000008199403,0.00001471234,0.0003482856,0.00001928491,0.0007109533],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0009650513,"threshold_uncertainty_score":0.003228426,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.005991562630017095,"score_gpt":0.2272633719788515,"score_spread":0.2212718093488344,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}