{"id":"W2171482734","doi":"10.1186/1471-2156-11-20","title":"A 2cM genome-wide scan of European Holstein cattle affected by classical BSE","year":2010,"lang":"en","type":"article","venue":"BMC Genetics","topic":"Prion Diseases and Protein Misfolding","field":"Biochemistry, Genetics and Molecular Biology","cited_by":26,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Alberta","funders":"Fondazione Cariplo","keywords":"PRNP; Bovine spongiform encephalopathy; Biology; Genetics; Single-nucleotide polymorphism; SNP; Disease; Microsatellite; Genome; Prion protein; Gene; Genotype; Allele; Medicine; Pathology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008656968,0.000287252,0.0004782246,0.001311392,0.000486171,0.0005758972,0.0003624453,0.0005216002,0.002167409],"category_scores_gemma":[0.001386944,0.0001627629,0.0003399836,0.001721879,0.000290626,0.0001722154,0.0004035558,0.0002247213,0.0001460668],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003071802,"about_ca_system_score_gemma":0.0002044905,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.008965587,"about_ca_topic_score_gemma":0.01436195,"domain_scores_codex":[0.999348,0.0001898437,0.00004802968,0.0002732032,0.00005961423,0.00008142497],"domain_scores_gemma":[0.9990714,0.0004509181,0.0001825684,0.00005112069,0.0001043925,0.0001395786],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001016638,0.00005326252,0.9785377,0.00005871525,0.0005711627,0.001095515,0.0004595494,0.0003255499,0.01320874,0.00004395187,0.0002938009,0.004335363],"study_design_scores_gemma":[0.00001731753,0.00005704676,0.9986864,0.00000468615,0.00008111366,0.0003735717,0.0001319404,0.0001667144,0.0002116403,0.00001362006,0.0002536276,0.000002433392],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9989281,0.00009354171,0.0001246484,0.00001757067,8.087945e-7,0.000003247406,0.000710005,0.000003838514,0.0001180784],"genre_scores_gemma":[0.9971266,0.00005731151,0.0003965698,0.00002867684,0.000002915388,0.00001140297,0.002207493,0.00000383059,0.0001650739],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.008965587,"threshold_uncertainty_score":0.0178268,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.008041778851747977,"score_gpt":0.2301753251863417,"score_spread":0.2221335463345937,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}