{"id":"W2171584441","doi":"10.1128/jcm.43.1.127-131.2005","title":"Ability of New APTIMA CT and APTIMA GC Assays To Detect <i>Chlamydia trachomatis</i> and <i>Neisseria gonorrhoeae</i> in Male Urine and Urethral Swabs","year":2005,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":75,"is_retracted":false,"has_abstract":true,"ca_institutions":"St. Joseph’s Healthcare Hamilton","funders":"","keywords":"Neisseria gonorrhoeae; Chlamydia trachomatis; Nucleic Acid Amplification Tests; Multiplex; Asymptomatic; Urine; Chlamydiales; Gonorrhea; Medicine; Chlamydiaceae; Chlamydia; False positive paradox; Virology; Biology; Microbiology; Internal medicine; Immunology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.003393367,0.0002489476,0.001178393,0.0003149291,0.00006999241,0.00001877132,0.0002314862,0.0003370235,0.0002833528],"category_scores_gemma":[0.00227119,0.0002037283,0.0001609357,0.000223278,0.0008470013,0.0002154811,0.0002074268,0.001280584,0.0000330818],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004449468,"about_ca_system_score_gemma":0.0001857928,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000114958,"about_ca_topic_score_gemma":0.0001357005,"domain_scores_codex":[0.996292,0.0009312051,0.001812578,0.0005140945,0.00002012005,0.0004299944],"domain_scores_gemma":[0.997134,0.001648803,0.0005711595,0.0003239398,0.0002054741,0.0001165887],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.001371324,0.0003377243,0.1740682,0.00004317507,0.0002052423,0.000009064375,0.0001426648,0.00003846453,0.7027082,0.00002457864,0.001388716,0.1196626],"study_design_scores_gemma":[0.006760254,0.002535583,0.8707705,0.0001068625,0.0001088234,0.012522,0.00008781551,0.00000958423,0.03847031,0.0005440164,0.06772868,0.0003555966],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9885238,0.008642929,0.0001964882,0.001664534,0.0003982345,0.00035463,0.000029189,0.000009897947,0.0001803116],"genre_scores_gemma":[0.994331,0.001221228,0.003743248,0.0002218662,0.0001315014,0.000004263206,0.000004323847,0.0000178561,0.0003246944],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6967023,"threshold_uncertainty_score":0.83078,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03381639644157808,"score_gpt":0.3609494889015968,"score_spread":0.3271330924600187,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}