{"id":"W2171692358","doi":"10.1002/cpe.3236","title":"A genome‐wide association study platform built on iPlant cyber‐infrastructure","year":2014,"lang":"en","type":"article","venue":"Concurrency and Computation Practice and Experience","topic":"Gene expression and cancer classification","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto; Ontario Institute for Cancer Research","funders":"National Science Foundation","keywords":"Workflow; Computer science; World Wide Web; Big data; Data sharing; Data science; Database; Operating system","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.006274093,0.0007527999,0.001147144,0.001967942,0.0006088684,0.002381591,0.002882477,0.0005843889,0.01403942],"category_scores_gemma":[0.009581158,0.0008840805,0.0009682107,0.002293989,0.000826332,0.002043884,0.005389181,0.001499654,0.007317744],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0008930895,"about_ca_system_score_gemma":0.002952054,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003364605,"about_ca_topic_score_gemma":0.002280746,"domain_scores_codex":[0.9967977,0.0008896196,0.0002004272,0.000873042,0.0009536355,0.0002855343],"domain_scores_gemma":[0.9935849,0.00245592,0.0005248024,0.001982416,0.0006351154,0.0008167851],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00721093,0.0005144057,0.03067005,0.001643985,0.001258985,0.003704714,0.00161495,0.04495143,0.05670765,0.0677698,0.4146299,0.3693231],"study_design_scores_gemma":[0.002985094,0.0008087829,0.0335653,0.0003797555,0.0008227394,0.003110227,0.0003280934,0.2164434,0.05529062,0.1137547,0.5719043,0.0006070072],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"methods","genre_gemma":"software","genre_scores_codex":[0.03334666,0.0009669297,0.7423511,0.003337026,0.0004364887,0.001099266,0.0396318,0.1507748,0.02805582],"genre_scores_gemma":[0.2760375,0.0009901113,0.6248639,0.002218909,0.0003743556,0.00331304,0.06997643,0.0123539,0.009871918],"genre_candidate":"software","genre_consensus":null,"teacher_disagreement_score":0.01403942,"threshold_uncertainty_score":0.04696655,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01550803087783823,"score_gpt":0.310285277526103,"score_spread":0.2947772466482648,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}