{"id":"W2171908816","doi":"10.1128/mbio.00865-14","title":"Autophagy Facilitates <i>Salmonella</i> Replication in HeLa Cells","year":2014,"lang":"en","type":"article","venue":"mBio","topic":"Autophagy in Disease and Therapy","field":"Medicine","cited_by":91,"is_retracted":false,"has_abstract":true,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"Canadian Institutes of Health Research","keywords":"Autophagy; Salmonella; Cytosol; Cell biology; HeLa; Biology; Intracellular; Autophagosome; Intracellular parasite; Phagosome; Lysosome; Cell; Microbiology; Biochemistry; Bacteria; Genetics; Apoptosis; Enzyme","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002047719,0.00009390558,0.0001670459,0.00006012157,0.00002613263,0.000008228481,0.00006853382,0.00007020115,0.0001821039],"category_scores_gemma":[0.00004551555,0.0000835633,0.00005616034,0.0001263331,0.00003729744,0.00003797585,0.00001448805,0.00009329196,0.0004801242],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003293049,"about_ca_system_score_gemma":0.00002444427,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00005186176,"about_ca_topic_score_gemma":0.000003441486,"domain_scores_codex":[0.9992212,0.00003767804,0.0001810481,0.0002720618,0.0001178073,0.0001701773],"domain_scores_gemma":[0.9992698,0.00004686461,0.00003690166,0.0005322307,0.00002624095,0.00008792692],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003921924,0.0008759288,0.02094344,0.0002037183,0.00007309409,0.00007066642,0.001430837,0.00004350649,0.8854646,0.002615648,0.01019391,0.07769246],"study_design_scores_gemma":[0.001998973,0.0002615989,0.09888402,0.0000611654,0.00002768481,0.00001169374,0.00006184787,0.001306341,0.8133931,0.002989388,0.0808183,0.0001859189],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.988701,0.0005441722,0.0002271389,0.0005563174,0.0001020162,0.0002169891,0.000005160196,0.0000956791,0.009551458],"genre_scores_gemma":[0.9945902,0.00006937351,0.0002290038,0.001322706,0.00008471624,0.00002571445,0.00002987203,0.00001359806,0.003634838],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.07794059,"threshold_uncertainty_score":0.6171185,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01022715739605087,"score_gpt":0.2619680535693633,"score_spread":0.2517408961733124,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}