{"id":"W2171908816","doi":"10.1128/mbio.00865-14","title":"Autophagy Facilitates <i>Salmonella</i> Replication in HeLa Cells","year":2014,"lang":"en","type":"article","venue":"mBio","topic":"Autophagy in Disease and Therapy","field":"Medicine","cited_by":91,"is_retracted":false,"has_abstract":true,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"Canadian Institutes of Health Research","keywords":"Autophagy; Salmonella; Cytosol; Cell biology; HeLa; Biology; Intracellular; Autophagosome; Intracellular parasite; Phagosome; Lysosome; Cell; Microbiology; Biochemistry; Bacteria; Genetics; Apoptosis; Enzyme","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001449436,0.0003129098,0.0003728438,0.0001873274,0.0002841777,0.0003249005,0.0001952306,0.0002535465,0.0009728387],"category_scores_gemma":[0.0001113869,0.0001853975,0.0004056415,0.0001797325,0.0001573303,0.0002334439,0.0002736194,0.0004691332,0.0008132159],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004176589,"about_ca_system_score_gemma":0.0002495043,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001708837,"about_ca_topic_score_gemma":0.001940349,"domain_scores_codex":[0.9997794,0.00003018279,0.00002345409,0.0000675301,0.00005073074,0.00004867189],"domain_scores_gemma":[0.9998747,0.00003095763,0.00002837298,0.00002455971,0.00002310985,0.00001820591],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00003865864,0.000007871121,0.00008618613,0.00002763805,0.000001861757,0.00002703231,0.00002060253,0.00001518957,0.9993087,0.00004273572,0.00005522801,0.0003682386],"study_design_scores_gemma":[0.000005674408,0.0001114963,0.003316938,0.00000740956,0.000009523921,0.0001562038,0.00003006819,0.0008193376,0.993175,0.00001980369,0.002343432,0.000005180793],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9741071,0.003630883,0.01015565,0.000317334,0.0001330282,0.00006618019,0.002006895,0.0004695714,0.00911336],"genre_scores_gemma":[0.9802527,0.001731274,0.01067119,0.0001952079,0.00003968753,0.0001022943,0.002199067,0.0001075105,0.004701139],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001708837,"threshold_uncertainty_score":0.003397822,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01022715739605087,"score_gpt":0.2619680535693633,"score_spread":0.2517408961733124,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}