{"id":"W2172003470","doi":"10.1128/jvi.01843-09","title":"Inactivation of <i>Burkholderia cepacia</i> Complex Phage KS9 gp41 Identifies the Phage Repressor and Generates Lytic Virions","year":2009,"lang":"en","type":"article","venue":"Journal of Virology","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":39,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Alberta","funders":"Canadian Institutes of Health Research","keywords":"Lytic cycle; Biology; Prophage; Lysogenic cycle; Microbiology; Burkholderia cenocepacia; Temperateness; Siphoviridae; Bacteriophage; Burkholderia cepacia complex; Lysogen; Burkholderia; Virology; Phage therapy; Gene; Genetics; Bacteria; Virus; Escherichia coli","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007245243,0.00032998,0.00011958,0.0001356148,0.0001125187,0.0002005355,0.0001787534,0.0001850007,0.0007620731],"category_scores_gemma":[0.00009489391,0.0001056127,0.0001695921,0.00009931218,0.0001819279,0.00009263474,0.0002067432,0.0003646937,0.0004168997],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002006744,"about_ca_system_score_gemma":0.0001136795,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001086433,"about_ca_topic_score_gemma":0.0009631925,"domain_scores_codex":[0.9998903,0.0000174403,0.00001039574,0.0000210603,0.00003145988,0.00002937096],"domain_scores_gemma":[0.9999202,0.00001616688,0.00002700983,0.00001300544,0.000006449744,0.00001703908],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00001566399,0.000007429644,0.0000922123,0.00000605988,8.074164e-7,0.00001148917,0.000003974485,0.00001533652,0.9995388,0.00002756431,0.000009510192,0.000271201],"study_design_scores_gemma":[0.000004113464,0.00007542669,0.003036186,0.000002361087,0.000004173726,0.0001159976,0.0000110662,0.0004991049,0.9951636,0.00001310177,0.001072768,0.000002075026],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9951658,0.0002929561,0.002786648,0.00005092833,0.00001224569,0.00002480742,0.0003744368,0.0001144532,0.001177702],"genre_scores_gemma":[0.9947886,0.0001996921,0.002143161,0.00002700787,0.000002947686,0.00001613946,0.0006625446,0.00003524439,0.002124587],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001086433,"threshold_uncertainty_score":0.00254941,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01245706199945033,"score_gpt":0.2541695290294805,"score_spread":0.2417124670300302,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}