{"id":"W2172198911","doi":"10.1086/431519","title":"Molecular and Clinical Epidemiology of CXCR4‐Using HIV‐1 in a Large Population of Antiretroviral‐Naive Individuals","year":2005,"lang":"en","type":"article","venue":"The Journal of Infectious Diseases","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":270,"is_retracted":false,"has_abstract":true,"ca_institutions":"St. Paul's Hospital; University of British Columbia","funders":"Michael Smith Health Research BC; Pfizer","keywords":"Epidemiology; Human immunodeficiency virus (HIV); Population; Molecular epidemiology; Virology; Medicine; Lentivirus; Viral disease; Immunology; Biology; Environmental health; Internal medicine; Genetics; Genotype","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005915885,0.000233852,0.0002895904,0.0007201724,0.0005461271,0.0006011987,0.0003525774,0.0004624499,0.0008607276],"category_scores_gemma":[0.001550882,0.0003123182,0.0001491953,0.0007737387,0.0005413024,0.0003701161,0.0003391116,0.0003411124,0.0001581472],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003094914,"about_ca_system_score_gemma":0.0002991479,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01482177,"about_ca_topic_score_gemma":0.01123876,"domain_scores_codex":[0.9993514,0.0001946621,0.00005469198,0.0001873222,0.0001257039,0.00008625197],"domain_scores_gemma":[0.9990734,0.000166708,0.0003441644,0.00006338406,0.0001331579,0.0002191513],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0000306982,0.0000122877,0.9991663,0.000002821169,0.00001728873,0.00003793065,0.00004759548,0.00001310961,0.0002476734,0.000006525149,0.00002347326,0.0003943316],"study_design_scores_gemma":[0.000003449403,0.00005994981,0.9993319,0.000002067447,0.000007288443,0.0003154399,0.0001229614,0.0000713491,0.00003219033,0.000005154428,0.00004632854,0.000001947367],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9996707,0.00009443052,0.00003584346,0.00001231119,0.000001328922,0.000004654367,0.00009268182,0.000001353351,0.00008659079],"genre_scores_gemma":[0.9996731,0.0000549876,0.00005141141,0.00001518662,0.000004934867,0.000004921571,0.0001526246,7.18496e-7,0.0000421279],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01482177,"threshold_uncertainty_score":0.02947098,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02753765568872999,"score_gpt":0.3586327817477715,"score_spread":0.3310951260590415,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}