{"id":"W2173798746","doi":"10.1128/aem.02156-15","title":"<i>In Vitro</i> Culture of Previously Uncultured Oral Bacterial Phylotypes","year":2015,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Oral microbiology and periodontitis research","field":"Dentistry","cited_by":34,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"National Institute of Dental and Craniofacial Research","keywords":"Microbiology; Biology; Bacteria; Actinomyces; Veillonella; Lachnospiraceae; Enrichment culture; Fastidious organism; Agar plate; Agar; Fusobacterium; Fusobacteria; Bacteroidetes; 16S ribosomal RNA; Bacteroides; Firmicutes; Streptococcus","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006290022,0.0006412838,0.000717273,0.0003168547,0.0003184009,0.0005733431,0.0005240548,0.0003486244,0.001180128],"category_scores_gemma":[0.0005299915,0.0002497644,0.0005161198,0.0004606459,0.0002157366,0.0002799712,0.0007426976,0.000560539,0.0009452195],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001721428,"about_ca_system_score_gemma":0.0003873243,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001579999,"about_ca_topic_score_gemma":0.002770415,"domain_scores_codex":[0.9991573,0.000167582,0.0001351764,0.0002271501,0.0001820091,0.0001307799],"domain_scores_gemma":[0.9996316,0.0001071183,0.00005823474,0.0000859839,0.00008984426,0.00002714326],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001120784,0.00006635512,0.001662218,0.0001463923,0.000009940912,0.0000730961,0.00006317982,0.00009238962,0.9943659,0.00005004813,0.000151274,0.003207089],"study_design_scores_gemma":[0.00001178615,0.0008020642,0.01544216,0.00006250013,0.00008465482,0.0003260438,0.0001415353,0.0008254409,0.9772598,0.00004912058,0.004976391,0.00001847606],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.962265,0.002105701,0.02462465,0.0002517896,0.0002085284,0.0008945942,0.003903866,0.0002148585,0.005531178],"genre_scores_gemma":[0.7956166,0.006036124,0.1671846,0.0004052499,0.0001899462,0.002141481,0.02065226,0.000179623,0.007594035],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001579999,"threshold_uncertainty_score":0.003947973,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01120944546590314,"score_gpt":0.2341808183592908,"score_spread":0.2229713728933877,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}