{"id":"W2173798746","doi":"10.1128/aem.02156-15","title":"<i>In Vitro</i> Culture of Previously Uncultured Oral Bacterial Phylotypes","year":2015,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Oral microbiology and periodontitis research","field":"Dentistry","cited_by":34,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"National Institute of Dental and Craniofacial Research","keywords":"Microbiology; Biology; Bacteria; Actinomyces; Veillonella; Lachnospiraceae; Enrichment culture; Fastidious organism; Agar plate; Agar; Fusobacterium; Fusobacteria; Bacteroidetes; 16S ribosomal RNA; Bacteroides; Firmicutes; Streptococcus","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001561198,0.0001741975,0.0003473939,0.00004222179,0.00003876585,0.0000106658,0.000155941,0.0003016544,0.0003263466],"category_scores_gemma":[0.000005973438,0.0001429436,0.00004458358,0.00005389754,0.000457104,0.00005571395,0.0001716234,0.0002079534,0.0002174617],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004446791,"about_ca_system_score_gemma":0.00001589539,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00007395666,"about_ca_topic_score_gemma":0.00004894982,"domain_scores_codex":[0.9989844,0.00009175126,0.0002454856,0.0003239371,0.00003414904,0.0003202695],"domain_scores_gemma":[0.999679,0.00001592309,0.00006839194,0.0001490805,0.000004550201,0.00008309207],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0004881892,0.0001112774,0.003544484,0.00001461261,0.0000274105,0.00002382335,0.0004870593,0.000001269261,0.9902697,0.00004913015,0.004418352,0.0005647337],"study_design_scores_gemma":[0.004625433,0.0002647816,0.005928004,0.0000112365,0.00002868003,0.0006521708,0.0009825815,0.00000163207,0.8218253,0.000295282,0.1649829,0.0004020448],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9970422,0.0009881853,0.000003919912,0.0000339111,0.0002684084,0.0002338371,0.0003564361,0.00001171245,0.001061424],"genre_scores_gemma":[0.9974902,0.0001173725,0.0003129906,0.0001668837,0.00007431884,0.0000159278,0.0007949563,0.00001313348,0.001014211],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1684444,"threshold_uncertainty_score":0.5829071,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01120944546590314,"score_gpt":0.2341808183592908,"score_spread":0.2229713728933877,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}