{"id":"W2174346028","doi":"10.1139/bcb-2013-0047","title":"Intron retention: a human <i>DKC1</i> gene common splicing event","year":2013,"lang":"en","type":"article","venue":"Biochemistry and Cell Biology","topic":"RNA regulation and disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":15,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"","keywords":"Biology; Intron; Gene; Dyskeratosis congenita; Genetics; Alternative splicing; Gene isoform; RNA splicing; Nonsense-mediated decay; Gene expression; Telomere; RNA; Cell biology","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":true,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007495872,0.0001609798,0.0001343935,0.00001640613,0.0001267412,0.00002488993,0.0001178899,0.0002374219,0.0001667807],"category_scores_gemma":[0.00001119629,0.0001504196,0.00007694389,0.00003920544,0.000129605,0.000003447128,0.0001138628,0.00006968073,0.00002273062],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000009796168,"about_ca_system_score_gemma":0.0000237374,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003521623,"about_ca_topic_score_gemma":0.000002053328,"domain_scores_codex":[0.9991003,0.00004138864,0.0002096642,0.0003792304,0.00004672568,0.0002226363],"domain_scores_gemma":[0.9994023,0.000005274695,0.00008837241,0.0002996775,0.00004734577,0.000157035],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00002108412,0.00005339314,0.007119714,0.00003078452,0.00001421538,8.781237e-7,0.000005343637,0.000002848687,0.9889045,0.00005920676,0.002130697,0.001657297],"study_design_scores_gemma":[0.0006063421,0.0001330889,0.00446717,0.000006472681,0.000017399,0.0000133752,0.0000427153,0.00004548383,0.9811194,0.0002589457,0.01307149,0.0002180918],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9932645,0.001593532,0.0001446815,0.0001860458,0.00006627735,0.0001406994,0.00001373512,0.0000184795,0.004572045],"genre_scores_gemma":[0.9952711,0.0001163458,0.0001354671,0.0004013916,0.0002874811,0.00003756029,0.0006226802,0.00001209626,0.003115814],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0109408,"threshold_uncertainty_score":0.6133934,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.006758234801220936,"score_gpt":0.2328495760980877,"score_spread":0.2260913412968668,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}