{"id":"W2176076884","doi":"10.1371/journal.pgen.1005608","title":"The RNAPII-CTD Maintains Genome Integrity through Inhibition of Retrotransposon Gene Expression and Transposition","year":2015,"lang":"en","type":"article","venue":"PLoS Genetics","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":7,"is_retracted":false,"has_abstract":true,"ca_institutions":"Child and Family Research Institute; University of British Columbia","funders":"Université de Namur; Canadian Institutes of Health Research; University at Albany; Natural Sciences and Engineering Research Council of Canada; Canadian Institute for Advanced Research","keywords":"Retrotransposon; Biology; Gene; CTD; RNA polymerase II; Genetics; Transcription (linguistics); Gene expression; Long terminal repeat; Regulation of gene expression; Genome; Cell biology; Transposable element; Promoter","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001409125,0.000441679,0.0003877875,0.0002515986,0.0001659592,0.0003996302,0.0003956242,0.0003072409,0.0009405387],"category_scores_gemma":[0.0001544454,0.0002151848,0.0003324027,0.000180858,0.0003446999,0.0001755346,0.0002607939,0.0008845018,0.0004204129],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004957285,"about_ca_system_score_gemma":0.0003168151,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005217937,"about_ca_topic_score_gemma":0.0007382284,"domain_scores_codex":[0.9997975,0.00002214034,0.00002358814,0.0000489077,0.00007058611,0.00003733711],"domain_scores_gemma":[0.9998341,0.0000282623,0.00005011086,0.00002467963,0.00001787997,0.00004505277],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00005103541,0.00001530469,0.000057642,0.00001886375,0.000003071744,0.00002142827,0.000003306538,0.00005787692,0.9990287,0.00007790733,0.00002020721,0.0006447018],"study_design_scores_gemma":[0.00001119592,0.0001066127,0.0009793127,0.000003138765,0.000005269713,0.00008701379,0.000004031004,0.0006866559,0.9966653,0.00002206849,0.001426776,0.000002699542],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9857805,0.003289627,0.006195877,0.000167285,0.00006224127,0.00007408319,0.0008812834,0.0002567676,0.003292323],"genre_scores_gemma":[0.9912539,0.0008382333,0.003912822,0.00005923863,0.00001171514,0.00006977241,0.0009390606,0.00004812665,0.002867044],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0009405387,"threshold_uncertainty_score":0.003596783,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04570387578068198,"score_gpt":0.228902617982621,"score_spread":0.183198742201939,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}