{"id":"W2176236019","doi":"10.1186/s12863-015-0290-0","title":"Genome-wide association and genomic prediction of breeding values for fatty acid composition in subcutaneous adipose and longissimus lumborum muscle of beef cattle","year":2015,"lang":"en","type":"article","venue":"BMC Genetics","topic":"Genetic and phenotypic traits in livestock","field":"Biochemistry, Genetics and Molecular Biology","cited_by":40,"is_retracted":false,"has_abstract":true,"ca_institutions":"Agriculture and Agri-Food Canada; Alberta Crop Industry Development Fund; University of Alberta","funders":"Alberta Livestock and Meat Agency; Western Canada Research Grid; Compute Canada","keywords":"Biology; Fatty acid; Genome-wide association study; Beef cattle; Single-nucleotide polymorphism; Crossbreed; Genetics; Animal science; Genotype; Gene; Biochemistry","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001778877,0.0002445912,0.0002578058,0.0007022424,0.0002500461,0.0004000335,0.000258453,0.0003239904,0.001007637],"category_scores_gemma":[0.002293002,0.0001378933,0.0003509567,0.0006635203,0.0002168606,0.000121289,0.0002644355,0.0002980588,0.0001525247],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001988831,"about_ca_system_score_gemma":0.0001910588,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.004271865,"about_ca_topic_score_gemma":0.006948472,"domain_scores_codex":[0.9993406,0.0002488643,0.00003549075,0.0002118028,0.00009220889,0.00007100862],"domain_scores_gemma":[0.9984111,0.0009568775,0.0003001133,0.0001076098,0.000125981,0.00009828513],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0004094779,0.0000295254,0.9815118,0.00001916657,0.0004311608,0.0000791533,0.0001019402,0.001294536,0.008936965,0.00004556993,0.00007534587,0.007065482],"study_design_scores_gemma":[0.00001360438,0.0000478507,0.995433,0.000005327921,0.0001065121,0.0001148376,0.00005109634,0.003643288,0.0004152281,0.00005824555,0.0001071021,0.000003859391],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9984131,0.0001575499,0.001106154,0.00001774358,0.000001886424,0.000002238702,0.000191279,0.000009057831,0.0001009083],"genre_scores_gemma":[0.9987,0.00003691875,0.0008903025,0.000009088674,0.000002796844,0.000003808288,0.0002848587,0.000003681908,0.00006858827],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.004271865,"threshold_uncertainty_score":0.009407699,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01850630246819916,"score_gpt":0.2326624914029328,"score_spread":0.2141561889347336,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}