{"id":"W2176236019","doi":"10.1186/s12863-015-0290-0","title":"Genome-wide association and genomic prediction of breeding values for fatty acid composition in subcutaneous adipose and longissimus lumborum muscle of beef cattle","year":2015,"lang":"en","type":"article","venue":"BMC Genetics","topic":"Genetic and phenotypic traits in livestock","field":"Biochemistry, Genetics and Molecular Biology","cited_by":40,"is_retracted":false,"has_abstract":true,"ca_institutions":"Agriculture and Agri-Food Canada; Alberta Crop Industry Development Fund; University of Alberta","funders":"Alberta Livestock and Meat Agency; Western Canada Research Grid; Compute Canada","keywords":"Biology; Fatty acid; Genome-wide association study; Beef cattle; Single-nucleotide polymorphism; Crossbreed; Genetics; Animal science; Genotype; Gene; Biochemistry","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002192418,0.0001054183,0.0001614462,0.0000452327,0.00002940885,0.000008740437,0.00007123467,0.0001553726,9.664604e-7],"category_scores_gemma":[0.00008885,0.0001196011,0.00003187498,0.00004294672,0.00006485827,0.000003197306,0.00006197071,0.00004105787,1.937008e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002974238,"about_ca_system_score_gemma":0.00006595231,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001403067,"about_ca_topic_score_gemma":0.00004493141,"domain_scores_codex":[0.9992093,0.00004461526,0.0002739854,0.0002145303,0.0001019974,0.0001555054],"domain_scores_gemma":[0.9994565,0.00004611673,0.0001662924,0.0001351374,0.0001263962,0.0000695566],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001294743,0.00006642095,0.5453221,0.0001018575,0.00003580435,1.072693e-7,0.000495834,0.003346542,0.4495309,0.00003533788,0.00005061163,0.0008850669],"study_design_scores_gemma":[0.000933562,0.001073995,0.9387621,0.00001489414,0.00006303242,0.000006121831,0.0001629462,0.0004237536,0.05737685,0.000956709,0.0001181787,0.0001078492],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9818956,0.003153171,0.01431149,0.00002171086,0.0001126146,0.0003132728,0.0001241614,0.00000440783,0.00006357465],"genre_scores_gemma":[0.9681951,0.0001376965,0.03139385,0.00001690415,0.0000864391,0.00001057315,0.000111696,0.00001552451,0.00003218332],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.39344,"threshold_uncertainty_score":0.4877191,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01850630246819916,"score_gpt":0.2326624914029328,"score_spread":0.2141561889347336,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}