{"id":"W2176871308","doi":"10.1111/j.1550-7408.2004.tb00570.x","title":"Phylogenetic Position of Species in the Genera <i>Anoplophrya, Plagiotoma</i>, and <i>Nyctotheroides</i> (Phylum Ciliophora), Endosymbiotic Ciliates of Annelids and Anurans","year":2004,"lang":"en","type":"article","venue":"Journal of Eukaryotic Microbiology","topic":"Protist diversity and phylogeny","field":"Biochemistry, Genetics and Molecular Biology","cited_by":35,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph; University of Ottawa","funders":"","keywords":"Biology; Ciliate; Phylogenetic tree; Phylum; Protozoa; Zoology; Protist; Phylogenetics; Ciliata; Evolutionary biology; Gene; Ecology; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001582401,0.0001310558,0.0001249237,0.001214947,0.0004815324,0.0003685743,0.0001589178,0.0001827297,0.0009651129],"category_scores_gemma":[0.0003619342,0.000130756,0.0001765324,0.0004366423,0.0002360854,0.0002169363,0.000409266,0.0002249912,0.0003922322],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002606686,"about_ca_system_score_gemma":0.0001985674,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001553455,"about_ca_topic_score_gemma":0.00389691,"domain_scores_codex":[0.9998686,0.00001807318,0.00001003291,0.00005222292,0.00002142415,0.00002963881],"domain_scores_gemma":[0.9995626,0.00008490549,0.0001601486,0.000032967,0.00006367824,0.00009578436],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0003443794,0.00003580861,0.5060073,0.00009545876,0.00006423832,0.0002034327,0.001499531,0.0002595401,0.4691122,0.0003655023,0.000120768,0.02189191],"study_design_scores_gemma":[0.00000639598,0.0000984116,0.987191,0.00001986166,0.00003310638,0.0005622122,0.0005625775,0.0005509806,0.008280713,0.000103896,0.002581838,0.000009085719],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9987499,0.0002328085,0.0002650137,0.00001499143,0.000001553234,0.000004006658,0.0001255332,0.000008248914,0.0005980897],"genre_scores_gemma":[0.9980327,0.0001153746,0.0009753666,0.00001277761,0.000002317348,0.000006985616,0.0004952067,0.000003760215,0.0003556527],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001553455,"threshold_uncertainty_score":0.003228664,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.006147670430727321,"score_gpt":0.1918861269295672,"score_spread":0.1857384564988399,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}