{"id":"W2181011150","doi":"10.1111/j.1550-7408.2004.tb00172.x","title":"Actin and Ubiquitin Protein Sequences Support a Cercozoan/Foraminiferan Ancestry for the Plasmodiophorid Plant Pathogens","year":2004,"lang":"en","type":"article","venue":"Journal of Eukaryotic Microbiology","topic":"Plant Disease Resistance and Genetics","field":"Agricultural and Biological Sciences","cited_by":71,"is_retracted":false,"has_abstract":true,"ca_institutions":"Dalhousie University; University of British Columbia; Canadian Institute for Advanced Research","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Michael Smith Health Research BC","keywords":"Biology; Protist; Phylogenetic tree; Gene; Phylogenetics; Genetics; Cullin; Ubiquitin ligase; Ubiquitin","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000141866,0.0002438405,0.0001665706,0.0005159028,0.0004823246,0.0002674152,0.0001255496,0.0003480085,0.002202674],"category_scores_gemma":[0.0003042914,0.00008925303,0.0001676571,0.0003378958,0.0003737992,0.0001833961,0.0002468301,0.0002605879,0.0005590972],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001723469,"about_ca_system_score_gemma":0.0001810814,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005936403,"about_ca_topic_score_gemma":0.001138126,"domain_scores_codex":[0.9999013,0.000007669737,0.000005878718,0.00003956207,0.00002286853,0.00002268101],"domain_scores_gemma":[0.9996685,0.00004120593,0.0001075626,0.00003623975,0.00004890643,0.00009763676],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0004773361,0.0000414405,0.07536706,0.00009480491,0.00003698883,0.0004754257,0.0001997511,0.0001316252,0.9093854,0.0003783402,0.0001571245,0.01325469],"study_design_scores_gemma":[0.00003231546,0.0001821092,0.907214,0.00003385501,0.00008094979,0.002517386,0.0004035362,0.0009768064,0.07988681,0.0005726626,0.008085547,0.00001408412],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9940467,0.000692704,0.001495519,0.000077309,0.00001763359,0.00001064813,0.0004282576,0.00003305442,0.003198144],"genre_scores_gemma":[0.9949887,0.0002423223,0.002174678,0.00008078868,0.0000166981,0.000009568268,0.001266244,0.00001036568,0.001210592],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002202674,"threshold_uncertainty_score":0.007368624,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02631905842488867,"score_gpt":0.2276562301617642,"score_spread":0.2013371717368755,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}