{"id":"W2181166417","doi":"10.1128/aem.02603-15","title":"A Virulent Phage Infecting Lactococcus garvieae, with Homology to Lactococcus lactis Phages","year":2015,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":15,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université Laval","funders":"","keywords":"ORFS; Biology; Siphoviridae; Lactococcus lactis; Virulence; Genome; Bacteriophage; Genetics; Open reading frame; Capsid; Microbiology; Lactococcus; Virology; Gene; Bacteria; Peptide sequence; Escherichia coli","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001053118,0.0005471008,0.0003741735,0.0004907998,0.0002221141,0.0003684628,0.0001274986,0.0002626953,0.0005509917],"category_scores_gemma":[0.000259035,0.0001094228,0.0002677464,0.0003179304,0.0001635227,0.0002347004,0.0004169702,0.0002988512,0.0001814382],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001887512,"about_ca_system_score_gemma":0.0001905501,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0008138295,"about_ca_topic_score_gemma":0.0007312277,"domain_scores_codex":[0.9998919,0.000009241327,0.000007671742,0.00002872135,0.00002555007,0.00003704744],"domain_scores_gemma":[0.9998325,0.00003994497,0.00004265064,0.0000131845,0.00002025141,0.00005137065],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00008858088,0.00002376696,0.003198608,0.00004539161,0.000006055361,0.0001429189,0.00005736347,0.00004554802,0.9941729,0.00002622669,0.00001503761,0.002177651],"study_design_scores_gemma":[0.00003132156,0.001182386,0.3036633,0.00004072552,0.00009575133,0.006907561,0.0005040551,0.002303137,0.6782746,0.0001897883,0.006768426,0.00003901396],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9986958,0.0002830945,0.0005730975,0.00001455045,0.000003910453,0.000009076154,0.0001446789,0.00001662703,0.0002591314],"genre_scores_gemma":[0.9933443,0.0003592634,0.002857123,0.00002624315,0.000006831508,0.00001766293,0.002009007,0.00001759274,0.001361897],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0008138295,"threshold_uncertainty_score":0.001843214,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.008099295001225108,"score_gpt":0.1990072461783454,"score_spread":0.1909079511771203,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}