{"id":"W2181415455","doi":"10.3389/fmicb.2015.01274","title":"Diversity and Homogeneity among Small Plasmids of Aeromonas salmonicida subsp. salmonicida Linked with Geographical Origin","year":2015,"lang":"en","type":"article","venue":"Frontiers in Microbiology","topic":"Aquaculture disease management and microbiota","field":"Immunology and Microbiology","cited_by":28,"is_retracted":false,"has_abstract":true,"ca_institutions":"Institut Universitaire de Cardiologie et de Pneumologie de Québec; Université Laval","funders":"Fonds de Recherche du Québec - Santé; Natural Sciences and Engineering Research Council of Canada; Fonds de recherche du Québec – Nature et technologies; Ministère de l'Agriculture, des Pêcheries et de l'Alimentation","keywords":"Aeromonas salmonicida; Biology; Plasmid; Genetics; Replicon; Virulence; Aeromonas; Gene; Genotyping; Insertion sequence; Microbiology; Genotype; Genome; Bacteria; Transposable element","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000119703,0.0001832278,0.0002106849,0.001071996,0.0002796694,0.0003962562,0.0001386163,0.0001687024,0.0006480622],"category_scores_gemma":[0.0005655732,0.0001108559,0.0001854619,0.0007648217,0.0002710019,0.0001232093,0.0002826632,0.0001883952,0.000173765],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003253608,"about_ca_system_score_gemma":0.0003848653,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01247618,"about_ca_topic_score_gemma":0.01286937,"domain_scores_codex":[0.999768,0.00001367628,0.00002075174,0.00008222861,0.00006549837,0.00004990805],"domain_scores_gemma":[0.9996314,0.00005571208,0.00011806,0.00002716897,0.0001049462,0.00006267577],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0004613664,0.00005811849,0.319493,0.0001026557,0.00007377435,0.0002896737,0.001206061,0.0001346808,0.6648567,0.0001168561,0.00008086131,0.01312624],"study_design_scores_gemma":[0.000006968852,0.0002219146,0.9840361,0.000006986952,0.00003922969,0.00086319,0.0004890586,0.0002229778,0.01277625,0.00003085096,0.001295918,0.00001050329],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9991714,0.0001230117,0.0002093128,0.000006451684,0.000001173425,0.000009206214,0.0002098046,0.000004257675,0.000265359],"genre_scores_gemma":[0.9983318,0.0001170775,0.0003874215,0.000006612418,0.000001872559,0.000008670393,0.0007623782,0.000002697311,0.0003814613],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01247618,"threshold_uncertainty_score":0.0248071,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01583453645148925,"score_gpt":0.2036573842281887,"score_spread":0.1878228477766995,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}