{"id":"W2182796952","doi":"10.1111/1462-2920.13154","title":"Prophages of the genus <scp> <i>B</i> </scp> <i>ifidobacterium</i> as modulating agents of the infant gut microbiota","year":2015,"lang":"en","type":"article","venue":"Environmental Microbiology","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":76,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université Laval","funders":"Science Foundation Ireland","keywords":"Biology; Prophage; Genome; Microbiome; Gut flora; Bifidobacterium; Evolutionary biology; Bacterial genome size; Genetics; Metagenomics; Microbiology; Genus; Bacteriophage; Bacteria; Zoology; Lactobacillus; Gene; Immunology; Escherichia coli","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002397189,0.000322316,0.0002020826,0.0008128553,0.0002198578,0.0005153607,0.000199261,0.0003147262,0.0006866104],"category_scores_gemma":[0.0004389332,0.0001243912,0.0002316683,0.0006128048,0.0001993602,0.0003478228,0.000383847,0.000418556,0.0002150888],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000119786,"about_ca_system_score_gemma":0.0002503781,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0007019723,"about_ca_topic_score_gemma":0.000928932,"domain_scores_codex":[0.9998622,0.00002751228,0.00001117519,0.00002715273,0.00004069229,0.00003122877],"domain_scores_gemma":[0.9997324,0.00007420323,0.00007612085,0.00002418097,0.00004086547,0.00005212392],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0004062606,0.00004175168,0.02471497,0.0002355431,0.00002156082,0.0003406854,0.0002025924,0.0001670625,0.9537809,0.0003205367,0.0000646257,0.01970349],"study_design_scores_gemma":[0.00003071304,0.001530756,0.4150348,0.0002570618,0.0002041343,0.003742358,0.001210504,0.002360398,0.5571043,0.0009095314,0.01756554,0.00004998185],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9908014,0.005036589,0.00222583,0.00005916767,0.00001619976,0.00002891619,0.0003782207,0.00001774922,0.001435964],"genre_scores_gemma":[0.986634,0.003827903,0.006963538,0.00006820019,0.00002295998,0.00003495131,0.001245351,0.00001795348,0.001185223],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0008128553,"threshold_uncertainty_score":0.002296984,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009529740078050852,"score_gpt":0.2067602415710141,"score_spread":0.1972305014929633,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}