{"id":"W2187335953","doi":"10.21769/bioprotoc.934","title":"Surface Polysaccharide Extraction and Quantification","year":2013,"lang":"en","type":"article","venue":"BIO-PROTOCOL","topic":"Streptococcal Infections and Treatments","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"","keywords":"Membrane; Polysaccharide; Lysis; Bacterial outer membrane; Lipid bilayer; Bilayer; Phospholipid; Chemistry; Cell envelope; Lipopolysaccharide; Cytoplasm; Cell membrane; Bacterial capsule; Biophysics; Biochemistry; Biology; Escherichia coli; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001410097,0.003697778,0.001863564,0.004703881,0.001566608,0.0010251,0.001236901,0.001242515,0.007567666],"category_scores_gemma":[0.001372637,0.0008169973,0.0009936491,0.003460629,0.0006713648,0.0009723568,0.001693378,0.002751036,0.007861942],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004417445,"about_ca_system_score_gemma":0.0008436772,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0009488382,"about_ca_topic_score_gemma":0.002402971,"domain_scores_codex":[0.9975496,0.0002835738,0.0002352179,0.0005194948,0.001065519,0.0003465924],"domain_scores_gemma":[0.998701,0.000168709,0.000115119,0.0002416088,0.0006528066,0.0001208271],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00008613355,0.0001263827,0.0003687647,0.0002864776,0.0000233794,0.000093852,0.00008113366,0.0001343635,0.9862217,0.0004617743,0.0008357874,0.01128007],"study_design_scores_gemma":[0.00005477872,0.000533233,0.00862834,0.0002468448,0.0001200539,0.0003908426,0.0001785806,0.003275988,0.919882,0.001425335,0.06516936,0.00009457209],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"methods","genre_gemma":"protocol","genre_scores_codex":[0.1933057,0.01698487,0.700984,0.0006319357,0.001184205,0.01238531,0.02173505,0.008131369,0.04465758],"genre_scores_gemma":[0.1313776,0.01715343,0.739794,0.0009439098,0.0003591465,0.01368831,0.0480075,0.001654282,0.04702185],"genre_candidate":"protocol","genre_consensus":null,"teacher_disagreement_score":0.007567666,"threshold_uncertainty_score":0.02531642,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0450781113728284,"score_gpt":0.3749940199571937,"score_spread":0.3299159085843653,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}